Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_031117.1 Length=44885 Score E Sequences producing significant alignments: (Bits) Value seq118827 89.7 1e-13 >seq118827 Length=45970 Score = 89.7 bits (98), Expect = 1e-13 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 685 AAAGAAAGGATTTCACCATAAATTTGATTTTGCAATGTCAAGAATATGGTTGACAAGGGA 744 |||||||||| || ||||| ||||||||||||||| | ||||||| | |||| || Sbjct 4114 AAAGAAAGGAATTTTTCATAAGTTTGATTTTGCAATGAAATTAATATGGATAACAAAAGA 4173 Query 745 TAGTCATGAGAAGGT-TGGAAATTATGTATTAATCCACTTTATGAATAATAAAAAGATAT 803 | || ||| | | |||||| || ||||| || |||||| || ||||||| ||| Sbjct 4174 CTCTTAT-CCAAGATACGAAAATTACGTGTTAATACATTTTATGGATCATAAAAACTTAT 4232 Query 804 TCGGTGTTGATTATATAGTTTGCGAAAATCAATAC-GAACTAAATGA 849 | ||| ||||||| | |||| || | || ||| ||||||||||| Sbjct 4233 TTGGTTGTGATTATTTGCCTTGC-AAGAACATTACAGAACTAAATGA 4278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143303547607506