Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29]
121,379 sequences; 412,270,594 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq26001 132 1e-25
seq30215 111 4e-19
seq63354 102 2e-16
>seq26001
Length=10617
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || | |||||||||||||||||||||||| |||||||||| | ||| | || |||
Sbjct 8773 AGCACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTACGGCCGTCT 8714
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| | || ||||| || | | ||||| || || |||
Sbjct 8713 TCAAGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTTGTCT 8654
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || ||| ||| |||| | | || ||| |||||||| || ||||| |||
Sbjct 8653 TGAATCTTGGCTTTAACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAATGGTT 8594
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| |||||||| || || ||||| | ||||||
Sbjct 8593 TTACCCGTGAGGGTTTTTACGAAAATTTGCATT 8561
>seq30215
Length=1837
Score = 111 bits (122), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | ||||||||| ||||| ||||| || |||||||| | || || | || |||
Sbjct 1732 AGGACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATCTGACAATGTACGACCGTCT 1673
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| | ||||| || |||||||| | | ||| ||||| | | || ||||| || |
Sbjct 1672 TCCAATTGCTTT--CCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGT 1615
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
|||||||||| |||||| |||| | | | || ||| ||| || || | ||||| |
Sbjct 1614 CTTGAATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTG 1555
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || | |||||| ||||| | ||||||
Sbjct 1554 TCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 1521
>seq63354
Length=4016
Score = 102 bits (112), Expect = 2e-16
Identities = 151/211 (72%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||||| |||||||||||||| |||| || || | || ||||| |
Sbjct 1980 CAAG-TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCTTCCA 1922
Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
||||| || |||||||| | | || || || | | |||||| || || |||||
Sbjct 1921 ATTGCTTT--CCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCTTTGTCTTG 1864
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || |||||| | || | | |||| ||| || ||||| | ||||| || ||
Sbjct 1863 GATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCGACTTCCAAGGTAATGGTCTT 1804
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || ||||| ||||||| |||||||
Sbjct 1803 ACCAGTAAGGGTCTTGACGAAGATCTGCATT 1773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1152026414309309
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |