Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq26001 132 1e-25 seq30215 111 4e-19 seq63354 102 2e-16 >seq26001 Length=10617 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||||||||||||||||||||| |||||||||| | ||| | || ||| Sbjct 8773 AGCACTAAATGAAGAGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTACGGCCGTCT 8714 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | || ||||| || | | ||||| || || ||| Sbjct 8713 TCAAGTTGCTTGCCAGCGAAGATCAATCTTTGCTGATCTGGAGGAATTCCCTCTTTGTCT 8654 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||| ||| |||| | | || ||| |||||||| || ||||| ||| Sbjct 8653 TGAATCTTGGCTTTAACATTCTCGATAGTATCCGAAGGTTCTACTTCTAGGGTAATGGTT 8594 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || |||||||| || || ||||| | |||||| Sbjct 8593 TTACCCGTGAGGGTTTTTACGAAAATTTGCATT 8561 >seq30215 Length=1837 Score = 111 bits (122), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||||||||| ||||| ||||| || |||||||| | || || | || ||| Sbjct 1732 AGGACCAAATGAAGAGTGGACTCCTTTTGAATATTGTAATCTGACAATGTACGACCGTCT 1673 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || | ||||| || |||||||| | | ||| ||||| | | || ||||| || | Sbjct 1672 TCCAATTGCTTT--CCAGCGAAGATCAAACGCTGTTGGTCTGGAGGAATACCTTCTTTGT 1615 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||||||||| |||||| |||| | | | || ||| ||| || || | ||||| | Sbjct 1614 CTTGAATTTTAGCCTTGACATTCTCGATGGTATCGGAAGGCTCAACCTCCAAGGTAATTG 1555 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || | |||||| ||||| | |||||| Sbjct 1554 TCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 1521 >seq63354 Length=4016 Score = 102 bits (112), Expect = 2e-16 Identities = 151/211 (72%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| |||||||||||||| |||| || || | || ||||| | Sbjct 1980 CAAG-TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCGTCTTCCA 1922 Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| || |||||||| | | || || || | | |||||| || || ||||| Sbjct 1921 ATTGCTTT--CCAGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCCTCTTTGTCTTG 1864 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || |||||| | || | | |||| ||| || ||||| | ||||| || || Sbjct 1863 GATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCGACTTCCAAGGTAATGGTCTT 1804 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||| ||||||| ||||||| Sbjct 1803 ACCAGTAAGGGTCTTGACGAAGATCTGCATT 1773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152026414309309