Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29] 121,379 sequences; 412,270,594 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq26001 107 2e-18 >seq26001 Length=10617 Score = 107 bits (118), Expect = 2e-18 Identities = 168/239 (70%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 111089 AGAGTTTAAA-AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAA 111147 |||||| | | |||||||||||| || ||||| | || || |||||||||||| | ||| Sbjct 8550 AGAGTTCACAGAATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACCATTACCCTAGAA 8609 Query 111148 ACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTT 111207 ||||| ||| || | | | || ||| || ||| |||||||| || || Sbjct 8610 GTAGAACCTTCGGATACTATCGAGAATGTTAAAGCCAAGATTCAAGACAAAGAGGGAATT 8669 Query 111208 CCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATG 111267 || ||||| ||||| | || | || ||||| ||| | ||||| ||| | Sbjct 8670 CCTCCAGATCAGCAAAGATTGATCTTCGCTGGCAAGCAACTTGAAGACGGCCGTACTCTT 8729 Query 111268 GCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||||| ||||| |||||||| ||||| || ||||||||| | ||||| || ||||| Sbjct 8730 TCCGATTACAATATCCAAAAAGAGTCTACTCTTCATTTAGTGCTTCGTCTTCGTGGTGG 8788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421187211923704