Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20abdita_20[genbank_20GCA_5F001015175.1_202015-05-29]
121,379 sequences; 412,270,594 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq26001 159 8e-34
seq30215 105 2e-17
>seq26001
Length=10617
Score = 159 bits (176), Expect = 8e-34
Identities = 156/201 (78%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| ||||| || ||||| || ||||| || || ||| || ||
Sbjct 8565 CAAATTTTCGTAAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAACCTTCGGAT 8624
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| |||||||| || ||| |||||||| |||||||| ||||| ||||| || ||||||
Sbjct 8625 ACTATCGAGAATGTTAAAGCCAAGATTCAAGACAAAGAGGGAATTCCTCCAGATCAGCAA 8684
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || || ||||| || | |||||| ||||||| || ||
Sbjct 8685 AGATTGATCTTCGCTGGCAAGCAACTTGAAGACGGCCGTACTCTTTCCGATTACAATATC 8744
Query 178104 CAAAAAGAATCAACACTGCAT 178124
|||||||| || || || |||
Sbjct 8745 CAAAAAGAGTCTACTCTTCAT 8765
>seq30215
Length=1837
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||| | || || || || || ||| | ||||| || || ||
Sbjct 1524 CAGATTTTCGTCAAGACTTTGACTGGTAAGACAATTACCTTGGAGGTTGAGCCTTCCGAT 1583
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| ||||| || ||||| ||||||||||| || ||||| ||||| ||
Sbjct 1584 ACCATCGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCTCCAGACCAACAG 1643
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| ||||| || | ||||| || | || | | ||||| || |
Sbjct 1644 CGTTTGATCTTCGCTGGAAAGCAATTGGAAGACGGTCGTACATTGTCAGATTACAATATT 1703
Query 178104 CAAAAAGAATCAACACTGCAT 178124
||||| || || || || |||
Sbjct 1704 CAAAAGGAGTCCACTCTTCAT 1724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1201859195230526
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |