Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq7579 96.9 3e-15
>seq7579
Length=34747
Score = 96.9 bits (106), Expect = 3e-15
Identities = 372/577 (64%), Gaps = 13/577 (2%)
Strand=Plus/Plus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
||||| | || || | || || ||||| ||| | |||||||| || |||||||||
Sbjct 14030 GGGGATTTGGGGCCAGTCTATGGATTCCAATGGCGTCATTTTGGGGCAGAATATAAAACT 14089
Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908
||||| |||||| | | |||||| | ||||| || | ||| || | | |||
Sbjct 14090 TGTCATGACGACTATTCAAACCAAGGAGTTGATCAATTGAATGATGTCATTCAAAGAATC 14149
Query 18909 AA-AACAAACCCAGAAAGCCGAC-GAATGAT---TATATCGTCTTGGAATCCAAAGGATA 18963
|| || || || | | ||| ||| ||| ||| || ||||||| ||| ||||
Sbjct 14150 AAGAATAATCCTA-----CGGACAGAAGGATCTGTATGTCAGCTTGGAACCCAGTGGATC 14204
Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATG-TCAGTTTTACGTTGCAAACGGT 19022
| || ||||| | |||| || ||||| ||| || ||| ||||| ||| | | | |
Sbjct 14205 TTCCAAAAATGGCATTACCACCTTGTCATT-GTTTTGCTCAATTTTATGTTCAAGATGAT 14263
Query 19023 GAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAAC 19082
|| ||||| || | ||||| || || | ||| | || || || || || |||||
Sbjct 14264 GAGTTATCATGTTTGATGTACCAAAGGTCTGCTGATGTTGGGCTCGGAGT-CCTTTCAAT 14322
Query 19083 ATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGA 19142
||||| | || || | | || || || | || ||| | || || ||| |||
Sbjct 14323 ATTGCAAGTTACGCTTTATTGACTTATATGATTGCTCATCTCTGTGGTCTCAAAGTTGGA 14382
Query 19143 GATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAA 19202
|| || |||| | | ||||| | ||| | || ||||||| | ||| |||| |||
Sbjct 14383 GACTTTGTTCACAGTTTTGGGGACACTCATGTCTATAAGAATCATGTTGATCCTTTGAAA 14442
Query 19203 GTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACA 19262
| ||||| || |||| |||||| || || | |||| || || ||
Sbjct 14443 GAACAGCTTAAAAGAGTTCCAAGACCTTTCCCAAAGCTGATCATTAACCGTAAAGTCGAG 14502
Query 19263 GATATAAACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccc 19322
| || | ||||| |||| || ||||| |||| || || ||||| | || |
Sbjct 14503 AAAATCGAGGACTTCAAATTTGAAGATTTCACTATTGAAGGTTACGATCCATATCCAACT 14562
Query 19323 cTAAAAATGGAAATGGCTCTTTAATGGATTTTTAAAT 19359
| |||||||||||||| |||||| |||||| ||
Sbjct 14563 ATTAAAATGGAAATGGCCGTTTAATATTTTTTTATAT 14599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398379071767845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |