Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq194783 244 8e-60
seq188621 217 1e-51
seq7579 197 1e-45
>seq194783
Length=813
Score = 244 bits (270), Expect = 8e-60
Identities = 438/631 (69%), Gaps = 8/631 (1%)
Strand=Plus/Plus
Query 101639 AGTGTTGGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTT-AAGAGCATCAATGTGATC 101697
||| |||| || ||||| ||| || ||||||||| | || | |||| |||||
Sbjct 71 AGTTTTGGGAAAGGTCTTGGAACTCTTGTCAACTGCTCTGCCAATGGAATCAC-GTGATT 129
Query 101698 TACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGAC 101757
|| | ||||| |||||| || |||||| ||| || ||| || |||| |||
Sbjct 130 CTTGTAAACGTGAGTATCTCCAATGTTATGGACAAAATCACCAACTCTTAAATTACAGAC 189
Query 101758 ATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCC 101817
|||||||||||| |||||| | || |||||| ||||| || ||||| |||||||| |
Sbjct 190 ATGAGCAATCATATGAGTTAACAAAGCATAGCTGGCAATATTGAATGGAACTCCTAAAGC 249
Query 101818 CATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTG 101877
|||||| | | |||||| |||| ||| ||||||| ||||| |||||||| ||
Sbjct 250 CATATCTCCAGCTCTTTGGTACAAAGAACAAGAAAGCTCTCCATTTTGAACATAAAACTG 309
Query 101878 -ACTTAATAC-ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCA 101935
|| || || |||||| || || | ||||||| |||||||| | |||||||||
Sbjct 310 TAC--AAAACTATGACATGGTGGGAGGGCCATTTTTGGAATGTCCACAGGATTCCAAGCT 367
Query 101936 CACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAAT 101995
||| | |||||||| || | || || ||||| || || | || | | | ||
Sbjct 368 GTCATGCAAATCCTTCTGTCATTTGGATTGGTTTTAATTGTGTGGATTACATTGCTCAAC 427
Query 101996 TGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGC 102055
|||||||| |||| ||| |||||||| | | ||| ||||| || ||||||||
Sbjct 428 TGGTCAACGCCTTTTCCAGTATAATCGTCGTGACAAGTTTTGTATTCAGCCCCGAAATGA 487
Query 102056 CTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGT 102115
| ||| ||||| ||||| || ||||| | |||||||| |||||||| || |||| |
Sbjct 488 CGCCATTGAAAGCCATATACTGGTCCCAAGTCTCCTTCTTCTCTGTCTGTAAGACCACAT 547
Query 102116 TTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACG-CCAGCTGCTGATAG 102174
|||||||| || ||| | | ||| ||| ||| || | | | | | ||| ||
Sbjct 548 TTATCTAAGAAATCTCTTGTGCAATTGTCATTCCAGATCTTAATGTTCTTGTCTTGA-AG 606
Query 102175 CTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCA 102234
| || | ||| ||||| | ||||||||||||||||||||| ||| | |||||
Sbjct 607 TACCTTAACATTAGTTTGACCTCTCACAAACCACAACAGTTCTTCAACTACAGCCCTCCA 666
Query 102235 AAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265
|| ||||| || || || || | ||||||
Sbjct 667 GAAGACTCTTTTTGTGGTCAACAAAGGAAAT 697
>seq188621
Length=750
Score = 217 bits (240), Expect = 1e-51
Identities = 389/562 (69%), Gaps = 6/562 (1%)
Strand=Plus/Minus
Query 101707 GTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAAT 101766
||||| |||||| || |||||| ||| || ||| || ||| ||||||||||||
Sbjct 650 GTGAGTATCTCCAATGTTATGGACAAAATCACCAACTCTTAAGTTACAGACATGAGCAAT 591
Query 101767 CATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGC 101826
||| |||||| | | |||||| ||||| || ||||| ||||| || ||||||||| |
Sbjct 590 CATATGAGTTAACAAAACATAGCTGGCAATATTGAATGGAACTCCCAAACCCATATCACC 531
Query 101827 TGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTG-ACTTAATA 101885
| |||||| |||| ||| ||||| | ||||| |||||||| || || || |
Sbjct 530 AGCTCTTTGGTACAAAGAACAAGAAAGTTCTCCATTTTGAACATAAAACTGTAC--AAAA 473
Query 101886 C-ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAAC 101944
| |||||| || || | |||||||||| ||||| | ||||||||| ||| |
Sbjct 472 CTATGACATGGTGGAAGGGCCATTTTAGGGATGTCCACAGGATTCCAAGCTGTCATGCAA 413
Query 101945 ATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACT 102004
|||||||| || | || || ||||| || || | || | || |||| ||||||||
Sbjct 412 ATCCTTCTGTCATTTGGATTGGTTTTAATTGTGTGGATTACATGGCTTAACTGGTCAACG 353
Query 102005 CCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGA 102064
|||| || ||||||| | | ||| ||||| || || ||||| | ||| |||
Sbjct 352 CCTTTGCCAGTATAATCATCATGACAAGTTTTGTATTCAGCCCCAAAATGACGCCATTGA 293
Query 102065 AATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAA 102124
|| ||||| || ||||| | |||||||| ||||| || || |||| |||||||||
Sbjct 292 AAGCCATATACTGGTCCCAAGTCTCCTTCTTCTCTATCTGTAAGACCACATTTATCTAAG 233
Query 102125 AATGATCTAGATCCATTCGCATCCCAAATGTGCACG-CCAGCTGCTGATAGCTCTTTGCT 102183
|| ||| | | ||| ||| ||| || | | | | | ||| || | ||
Sbjct 232 AAATCTCTTGTGCAATTATCATTCCAGATCTTAATGTTCTTGTCTTGA-AGTACCTTCAC 174
Query 102184 GTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCT 102243
| || ||||| | ||||||||||||||||||||| ||| | ||||| || |||||
Sbjct 173 ATTGGTTTGACCTCTCACAAACCACAACAGTTCTTCAACTACAGCCCTCCAGAAGACTCT 114
Query 102244 CTTAGTAGTTAAAAGTGGAAAT 102265
||||| || | | ||||||
Sbjct 113 TTTAGTGGTCAGCAAAGGAAAT 92
>seq7579
Length=34747
Score = 197 bits (218), Expect = 1e-45
Identities = 433/646 (67%), Gaps = 7/646 (1%)
Strand=Plus/Minus
Query 101643 TTGGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACAT 101702
|||| || ||||| ||| || | | ||| ||| | || ||||| |||| ||
Sbjct 14476 TTGGGAAAGGTCTTGGAACTCTTTTAAGCTGTTCTTTCAAAGGATCAACATGATTCTTAT 14417
Query 101703 AGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACT---AGATTAGTGACAT 101759
||| |||| || || | | | || | ||| |||||| ||| ||| | || ||
Sbjct 14416 AGACATGAGTGTCCCCAAAACTGTGAACAAAGTCTCCA---ACTTTGAGACCACAGAGAT 14360
Query 101760 GAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCA 101819
|||||||||| |||| || | || || || ||||| || || || ||||| | ||| |
Sbjct 14359 GAGCAATCATATAAGTCAATAAAGCGTAACTTGCAATATTGAAAGG-ACTCCGAGCCCAA 14301
Query 101820 TATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGAC 101879
|||||| || ||||| |||| ||| || | || |||| ||||||||||||
Sbjct 14300 CATCAGCAGACCTTTGGTACATCAAACATGATAACTCATCATCTTGAACATAAAATTGAG 14241
Query 101880 TTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACA 101939
|| ||||||||| || || ||||||| |||| || |||||||| |||
Sbjct 14240 CAAAACAATGACAAGGTGGTAATGCCATTTTTGGAAGATCCACTGGGTTCCAAGCTGACA 14181
Query 101940 TTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGT 101999
| | |||||||| || ||||| || | || || | | ||| | | || ||||| |
Sbjct 14180 TACAGATCCTTCTGTCCGTAGGATTATTCTTGATTCTTTGAATGACATCATTCAATTGAT 14121
Query 102000 CAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCC 102059
||||||||| | ||| ||| | | |||||||||||| || ||||| | ||
Sbjct 14120 CAACTCCTTGGTTTGAATAGTCGTCATGACAAGTTTTATATTCTGCCCCAAAATGACGCC 14061
Query 102060 ACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTAT 102119
| || |||||||| || || || | ||| ||||| || || ||| ||||||| |||||
Sbjct 14060 ATTGGAATCCATAGACTGGCCCCAAATCCCCTTCTTCCCTATCAGTAAAACCACATTTAT 14001
Query 102120 CTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTT 102179
| || ||| || | | || ||||||| || | |||| | || || ||
Sbjct 14000 CCAAGAATTCCCTGGTGCTGTTTCCATCCCATATTTTCACGTTTTTTTCTTGTAAAATTT 13941
Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239
|| | ||| ||| |||| ||||| | |||||||| ||||||||||||| ||||
Sbjct 13940 TGGCATTAGTTTGACCTTTGATGAACCAAAGAAGTTCTTCTGCAACACCTCTCCAGAATA 13881
Query 102240 CTCTCTTAGTAGTTAAAAGTGGAAATTCATTTTCTAAACTAAACCT 102285
| || || |||||||| | |||||| | || | | | |||||||
Sbjct 13880 CCCTTTTTGTAGTTAATAATGGAAACTGATCTCTGAGATTAAACCT 13835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360233984468291
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |