Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq7579 197 2e-45
seq43178 174 2e-38
seq194783 168 1e-36
seq188621 167 4e-36
seq229830 127 3e-24
seq160753 125 1e-23
>seq7579
Length=34747
Score = 197 bits (218), Expect = 2e-45
Identities = 357/515 (69%), Gaps = 14/515 (3%)
Strand=Plus/Minus
Query 205449 ATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTAAACC 205508
||| ||||||||||||||||||||| ||||| |||| ||| || || || || | ||
Sbjct 14361 ATGAGCAATCATATAAGTCAATAAAGCGTAACTTGCAATATTGAAAGG-ACTCCGAGCCC 14303
Query 205509 CATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATTAATTACATGAAA 205568
| |||||| || ||||| ||||| ||||| | | | || | || ||| |||
Sbjct 14302 AACATCAGCAGACCTTTGGTACATCAAACATGATAACTCATCATCTTGAA---CATAAAA 14246
Query 205569 TTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGC 205628
||| ||||||||||||||||||||| |||| ||| || ||| | || ||||| ||
Sbjct 14245 TTGAGCAAAACAATGACAAGGTGGTAATGCCATTTTTGGAAGATCCACTGGGTTCCAAGC 14186
Query 205629 TGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATATGTGTTAA 205688
|| | || |||| ||| ||||| || ||| | | || | || | ||
Sbjct 14185 TGACATACAGATCCTTCTGTCCGTAGGATTATTCTTGATTCTTTGAATGACATCATTCAA 14126
Query 205689 TTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAA----TATATTTAGCACCAA 205744
|||||||| |||||| |||| ||| | || ||| ||| |||||| || ||||
Sbjct 14125 TTGATCAACTCCTTGGTTTGAATAGTC-GT---CATGACAAGTTTTATATTCTGCCCCAA 14070
Query 205745 AATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAAC 205804
||||||||||||| || ||||| ||||| || ||||| ||||||| |||||| ||||||
Sbjct 14069 AATGACGCCATTGGAATCCATAGACTGGCCCCAAATCCCCTTCTTCCCTATCAGTAAAAC 14010
Query 205805 CACGtttttttatatattttaatgat-ccattttcatcccaaatatggattcctttattt 205863
||| ||| | | | | || || | | ||| ||||||| || | | ||| | |
Sbjct 14009 CACATTTATCCA-AGAATTCCCTGGTGCTGTTTCCATCCCATATTTTCACGTTTTTTTCT 13951
Query 205864 tttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCTTCAACAATTCCT 205923
| || ||| || | ||||||| || || ||||| | | |||||| ||| |||
Sbjct 13950 TGTAAAATTTTGGCATTAGTTTGACCTTTGATGAACCAAAGAAGTTCTTCTGCAACACCT 13891
Query 205924 CTCCAAAACATTGATTTTGTTGTAAATAATGGAAA 205958
||||| || | |||||| || |||||||||||
Sbjct 13890 CTCCAGAATACCCTTTTTGTAGTTAATAATGGAAA 13856
>seq43178
Length=4857
Score = 174 bits (192), Expect = 2e-38
Identities = 316/460 (69%), Gaps = 12/460 (3%)
Strand=Plus/Plus
Query 202934 AATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATTCTTAAA 202993
|| ||||||||||| || |||||||| | || || || |||||||||||||| ||
Sbjct 3 AAAGCTTCTTCTGGAGAAGAAGTCCATTCAAGAATCTTCTTTGCCCAATACATTCTCAAG 62
Query 202994 TATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAATTGTCA 203053
| |||||||||||||| | |||||| ||| |||| | || ||||| |||| |||
Sbjct 63 AAACCATGCATTTTACCCTCATTAATCAATTGAATTTGAGCTGAGTTCCACAAATCATCA 122
Query 203054 TGAGTTAATGCATTTTCAAGTTGATATAAACTATATATATGTTTTCTAGTATCATTTTTA 203113
| |||| || | ||| | || | |||| | | | |||| | || || |
Sbjct 123 TAAGTTTTAGCTTCTTCCAATTCTGTCTTAGTATACAAAGGACTTCTTTTGTCCTTACGA 182
Query 203114 TGTTCATTTAGTGTTTTTATTGCCCAATTATT--AGCACCATTTATATTATCGTAATTTT 203171
|| | | | |||||| ||||||| | | ||| | | | |||||||| ||||
Sbjct 183 TGATTGTCCAAGGTTTTTCGAGCCCAATCACTCAAGCCCGA--AAGTTTATCGTAGTTTT 240
Query 203172 CATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCTTCACAAAAAA 203231
||||||| ||||||| |||||| |||||| | |||| ||||||||||||||||||
Sbjct 241 CATTATAGAAACAAAAGTTATCAGCAAGTTCTCTTCGAACAATAGCTTCTTCACAAAATG 300
Query 203232 CTTCTACCGATTT----AGGATATAATTTTTTATATTTGTTAATTTCTAATATTATTCTT 203287
|||| || | ||| | || || ||| || |||| | | || | ||||
Sbjct 301 CTTCAACAGCTTTTGAGTGCTTAGAA----GCATACTTCTTAACGTGAAGTACTGCTCTT 356
Query 203288 TGAGTTGAAATTTGACCAAAATGTATCCATGGTGATAAATTACTTATTGCATTAGCATTT 203347
||| |||| ||| |||||||| | ||| ||||| | || | ||||| |||||
Sbjct 357 TGACAGGAAAGTTGTCCAAAATGAAACCAAGGTGAAAGGTTGGAGACTGCATCTACATTT 416
Query 203348 GGATCATTTCtttttttAGCATAATCTTTTAATCTATTTT 203387
|||||||||||||| | ||| ||| |||||| | |||||
Sbjct 417 GGATCATTTCTTTTATCGGCAAAATATTTTAACCGATTTT 456
>seq194783
Length=813
Score = 168 bits (186), Expect = 1e-36
Identities = 373/557 (67%), Gaps = 7/557 (1%)
Strand=Plus/Plus
Query 205408 CCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTC 205467
||||| ||||| | ||| ||| | |||||||| | ||| |||||||||| |||
Sbjct 149 CCAATGTTATGGACAAAATCACCAACTCTTAAATTACAGACATGAGCAATCATATGAGTT 208
Query 205468 AATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGA 205527
|| ||| ||| || |||| ||| ||||| || |||||| ||||||| | | ||||||
Sbjct 209 AACAAAGCATAGCTGGCAATATTGAATGGAACTCCTAAAGCCATATCTCCAGCTCTTTGG 268
Query 205528 TACATTTGACATGTAAGATATTTATTATTAATTACATGAAATTGTACAAAACAATGACAA 205587
|||| ||| | ||| | | ||| | || ||| ||| |||||||||| ||||||
Sbjct 269 TACAAAGAACAAGAAAGCTCTCCATTTTGAA---CATAAAACTGTACAAAACTATGACAT 325
Query 205588 GGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTA 205647
||||| | |||| ||| || || | ||||||||| ||||| | || ||||
Sbjct 326 GGTGGGAGGGCCATTTTTGGAATGTCCACAGGATTCCAAGCTGTCATGCAAATCCTTCTG 385
Query 205648 GATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTT 205707
| || || |||| ||| | | || | || | || || |||| ||||
Sbjct 386 TCATTTGGATTGGTTTTAATTGTGTGGATTACATTGCTCAACTGGTCAACGCCTTTTCCA 445
Query 205708 GTATAAT--TTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCAT 205765
||||||| | || | | | | |||| ||| || ||||||||||||||||| ||||
Sbjct 446 GTATAATCGTCGTGACAAGTTT--TGTATTCAGCCCCGAAATGACGCCATTGAAAGCCAT 503
Query 205766 AAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatatttta 205825
| ||||| || || || ||||||| ||| || ||| ||||| ||| | || | | |
Sbjct 504 ATACTGGTCCCAAGTCTCCTTCTTCTCTGTCTGTAAGACCACATTTATCTAAGAAATCTC 563
Query 205826 atgatccattttcatcccaaatatggattcctttattttttaGAATATTTGTATTAGTTG 205885
|| | ||| |||| ||| || | || || | || || | || |||||||
Sbjct 564 TTGTGCAATTGTCATTCCAGATCTTAATGTTCTTGTCTTGAAGTACCTTAACATTAGTTT 623
Query 205886 ATCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTG 205945
|| | |||||| || | ||||||||| | | ||||| || | | |||||| |
Sbjct 624 GACCTCTCACAAACCACAACAGTTCTTCAACTACAGCCCTCCAGAAGACTCTTTTTGTGG 683
Query 205946 TAAATAATGGAAATGAA 205962
| || || |||||||||
Sbjct 684 TCAACAAAGGAAATGAA 700
>seq188621
Length=750
Score = 167 bits (184), Expect = 4e-36
Identities = 374/559 (67%), Gaps = 11/559 (2%)
Strand=Plus/Minus
Query 205408 CCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTC 205467
||||| ||||| | ||| ||| | |||| ||| | ||| |||||||||| |||
Sbjct 640 CCAATGTTATGGACAAAATCACCAACTCTTAAGTTACAGACATGAGCAATCATATGAGTT 581
Query 205468 AATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGA 205527
|| ||| ||| || |||| ||| ||||| || || |||||||||||| | | ||||||
Sbjct 580 AACAAAACATAGCTGGCAATATTGAATGGAACTCCCAAACCCATATCACCAGCTCTTTGG 521
Query 205528 TACATTTGACATGTAAGATATTTATTATTAATTACATGAAATTGTACAAAACAATGACAA 205587
|||| ||| | ||| | | ||| | | |||| ||| |||||||||| ||||||
Sbjct 520 TACAAAGAACAAGAAAGTTCTCCATTTTGA---ACATAAAACTGTACAAAACTATGACAT 464
Query 205588 GGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTA 205647
||||| | |||| || | || | ||||||||| ||||| | || ||||
Sbjct 463 GGTGGAAGGGCCATTTTAGGGATGTCCACAGGATTCCAAGCTGTCATGCAAATCCTTCTG 404
Query 205648 GATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTT 205707
| || || |||| ||| | | || | ||| |||| || |||| ||||
Sbjct 403 TCATTTGGATTGGTTTTAATTGTGTGGATTACATGGCTTAACTGGTCAACGCCTTTGCCA 344
Query 205708 GTATAATTTGTATCCATATCAA----TATATTTAGCACCAAAATGACGCCATTGAAAACC 205763
||||||| || ||| ||| | |||| ||| |||||||||||||||||||| ||
Sbjct 343 GTATAAT---CAT-CATGACAAGTTTTGTATTCAGCCCCAAAATGACGCCATTGAAAGCC 288
Query 205764 ATAAACTGGACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattt 205823
||| ||||| || || || ||||||| |||||| ||| ||||| ||| | || | |
Sbjct 287 ATATACTGGTCCCAAGTCTCCTTCTTCTCTATCTGTAAGACCACATTTATCTAAGAAATC 228
Query 205824 taatgatccattttcatcccaaatatggattcctttattttttaGAATATTTGTATTAGT 205883
| || | ||| |||| ||| || | || || | || || | || ||| ||
Sbjct 227 TCTTGTGCAATTATCATTCCAGATCTTAATGTTCTTGTCTTGAAGTACCTTCACATTGGT 168
Query 205884 TGATCCAGATATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGT 205943
| || | |||||| || | ||||||||| | | ||||| || | | ||| ||
Sbjct 167 TTGACCTCTCACAAACCACAACAGTTCTTCAACTACAGCCCTCCAGAAGACTCTTTTAGT 108
Query 205944 TGTAAATAATGGAAATGAA 205962
|| | || |||||||||
Sbjct 107 GGTCAGCAAAGGAAATGAA 89
>seq229830
Length=7395
Score = 127 bits (140), Expect = 3e-24
Identities = 167/230 (73%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| | || || || ||||| || |||| |||| || |
Sbjct 6015 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACTATTACCTTAGAAGTTGAGCCATCT 6074
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| |||||| || | || || |||||||| ||||||||||| || || |||| |
Sbjct 6075 GACACAATTGAAAACGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATC-A 6133
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | || || ||||| || |||||||| || ||| |||| || ||| || || |||
Sbjct 6134 CAACGTCTCATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACTTTAAGCGACTACAAT 6193
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| ||||| ||| | || |||||| | ||| | ||||| |||||
Sbjct 6194 ATCCAAAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTCGAGGAGGTAT 6243
Score = 113 bits (124), Expect = 7e-20
Identities = 189/270 (70%), Gaps = 4/270 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | || || ||||| || || | ||| ||||| ||
Sbjct 5559 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACCATCC 5618
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| ||| | ||| |||||||| || || ||||| || || || || ||
Sbjct 5619 GATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGACCAG 5678
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || || || || |||||||| || ||| | || || || ||||| ||
Sbjct 5679 CAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTACAAC 5738
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777
||||||||||||||||| | || ||||| || ||| | || || ||||| ||| |||
Sbjct 5739 ATTCAAAAAGAATCAACCCTTCACTTGGTATTGCGTCTTCGTGGAGGTATGCAAATTTTC 5798
Query 124778 ATAAAAA--TTGATTGTAAATAAATATCAC 124805
| |||| |||| || ||| || |||||
Sbjct 5799 GTCAAAACCTTGACTGGAAA-AACCATCAC 5827
Score = 113 bits (124), Expect = 7e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | || || ||||| || || | || |||| | |
Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| |||||| || | || || || ||||| ||||||||||| || || ||||||
Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || ||||| || |||||||| || || | || ||||| ||| |||||
Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCAGACTATAAC 5966
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||||||||| || | ||||| || |||||| | |||| |||||
Sbjct 5967 ATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGAGGTAT 6016
>seq160753
Length=592
Score = 125 bits (138), Expect = 1e-23
Identities = 192/270 (71%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | || || | || ||||||||||| || | || ||||| || |
Sbjct 591 ATGCAGATCTTCGTCAAAACCTTGACTGGCAAAACTATCACCCTTGAAGTTGAACCATCT 532
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| |||||| || | || || || || ||||||||||| || || || |||||
Sbjct 531 GACACAATTGAAAACGTCAAGGCTAAGATCCAGGATAAAGAAGGAATCCCTCCAGATCAG 472
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || || || || |||||||| || ||| | || |||||| |||||||||
Sbjct 471 CAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACATTATCAGATTATAAC 412
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATTC 124777
|| ||||| || |||||| | || |||||| | ||| | || |||||||| | | |||
Sbjct 411 ATCCAAAAGGAGTCAACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGTATGCAGATTTTC 352
Query 124778 ATAAAAA--TTGATTGTAAATAAATATCAC 124805
| |||| |||| || ||| || ||||||
Sbjct 351 GTCAAAACTTTGACTGGAAA-AACTATCAC 323
Score = 114 bits (126), Expect = 2e-20
Identities = 113/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| ||||||||||| |||||||| || || ||||||||| | | || || || |||||
Sbjct 279 AAGATTCAAGATAAGGAAGGTATCCCTCCAGATCAACAACGTTTGATCTTCGCCGGAAAG 220
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|| || || ||| | || ||||| ||||||||| |||||||| || ||||| | |||
Sbjct 219 CAGTTGGAAGATGGACGCACATTGTCAGATTATAACATTCAAAAGGAGTCAACCCTTCAT 160
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || ||| | || ||||||||
Sbjct 159 TTGGTATTGCGTCTCCGTGGTGGTAT 134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 753274233628800
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