Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq43178 111 3e-19
>seq43178
Length=4857
Score = 111 bits (122), Expect = 3e-19
Identities = 211/307 (69%), Gaps = 4/307 (1%)
Strand=Plus/Minus
Query 189257 GTTGAAACGTTTATAGATGAAATAATTGTAAGAAGAGAACTATCGGATAATTTTTGTTAC 189316
|||||| | ||| || ||| ||||| |||||||||| | ||||| ||||||| |
Sbjct 307 GTTGAAGCATTTTGTGAAGAAGCTATTGTTCGAAGAGAACTTGCTGATAACTTTTGTTTC 248
Query 189317 TATAACAAACATTATGATAGTATC-CAGTCTACTCATTCAT-GGGCCAGAAAAACATTAG 189374
||||| || | || |||| | | | || | | | || |||| ||||||| || |
Sbjct 247 TATAATGAAAACTACGATAAACTTTCGGGCT--TGAGTGATTGGGCTCGAAAAACCTTGG 190
Query 189375 AAGATCACATTAATGATCCTAGAAAGTATATATATTCCATTAAACAACTCGAAAAAGCGG 189434
| |||| ||| || |||| | | ||| | | | | || | ||| ||||
Sbjct 189 ACAATCATCGTAAGGACAAAAGAAGTCCTTTGTATACTAAGACAGAATTGGAAGAAGCTA 130
Query 189435 AAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGC 189494
||||| ||||| | | |||||| | | ||||| || || | | || || |||||||
Sbjct 129 AAACTTATGATGATTTGTGGAACTCAGCTCAAATTCAATTGATTAATGAGGGTAAAATGC 70
Query 189495 ATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAG 189554
|| |||| || ||||||||||||| |||||||| |||||||||||| | || ||||
Sbjct 69 ATGGTTTCTTGAGAATGTATTGGGCAAAGAAGATTCTTGAATGGACTTCTTCTCCAGAAG 10
Query 189555 ACGCTTT 189561
| |||||
Sbjct 9 AAGCTTT 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 920530596101640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |