Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq54491 98.7 1e-15
seq216245 87.8 2e-12
seq136848 84.2 2e-11
>seq54491
Length=5963
Score = 98.7 bits (108), Expect = 1e-15
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 5768 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 5709
Query 60124 TATACTACCGAGGATTG 60140
||||||| |||||||||
Sbjct 5708 TATACTATCGAGGATTG 5692
>seq216245
Length=1448
Score = 87.8 bits (96), Expect = 2e-12
Identities = 57/63 (90%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135
|||||| |||||| ||||||||||||||||||||| ||||| |||||||||||| ||||
Sbjct 1443 GGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTATCGAG 1384
Query 60136 GAT 60138
|||
Sbjct 1383 GAT 1381
>seq136848
Length=506
Score = 84.2 bits (92), Expect = 2e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 60078 GAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137
|||| |||||| ||||||||||||||||||||| ||||| |||||||||||| ||||||
Sbjct 301 GAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTATCGAGGA 242
Query 60138 T 60138
|
Sbjct 241 T 241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570166183623480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |