Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq229830 104 3e-17
seq160753 89.7 8e-13
seq193759 86.0 9e-12
>seq229830
Length=7395
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| ||||| || | |||||| ||||| | ||||||||||| || ||||| |||||
Sbjct 6013 CCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGAC 5954
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| || | | || || |||||||| |||||||| ||||| | ||| ||||| ||||||
Sbjct 5953 AATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 5894
Query 146171 ATTCCTTCTTTATCTTG 146187
|| |||||||| |||||
Sbjct 5893 ATACCTTCTTTGTCTTG 5877
>seq160753
Length=592
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||| | | ||||| || | ||| || || || || |||||||||||
Sbjct 365 CCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGAT 424
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| || | | ||| || |||||||| ||||| || ||||| | ||||||||| |||||
Sbjct 425 AATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGG 484
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||||||||| ||
Sbjct 485 ATTCCTTCTTTATCCTG 501
>seq193759
Length=801
Score = 86.0 bits (94), Expect = 9e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155
||||| |||| |||||||| | || || | ||||| || |||||||| ||| |||||
Sbjct 357 ATATTGTAATTGGAAAGAGTACGGCCATATTTAAATTGCTTGCCAGCAAAGATCCATCTT 298
Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|| ||||| ||||||||||| ||||| |||||
Sbjct 297 TGTTGATCTGGAGGAATTCCCTCTTTGTCTTG 266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741379086462720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |