Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq229830 104 3e-17 seq160753 89.7 8e-13 seq193759 86.0 9e-12 >seq229830 Length=7395 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| || | |||||| ||||| | ||||||||||| || ||||| ||||| Sbjct 6013 CCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGAC 5954 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | || || |||||||| |||||||| ||||| | ||| ||||| |||||| Sbjct 5953 AATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 5894 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 5893 ATACCTTCTTTGTCTTG 5877 >seq160753 Length=592 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | | ||||| || | ||| || || || || ||||||||||| Sbjct 365 CCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGAT 424 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || |||||||| ||||| || ||||| | ||||||||| ||||| Sbjct 425 AATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGG 484 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||||||||| || Sbjct 485 ATTCCTTCTTTATCCTG 501 >seq193759 Length=801 Score = 86.0 bits (94), Expect = 9e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||| |||| |||||||| | || || | ||||| || |||||||| ||| ||||| Sbjct 357 ATATTGTAATTGGAAAGAGTACGGCCATATTTAAATTGCTTGCCAGCAAAGATCCATCTT 298 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || ||||| ||||||||||| ||||| ||||| Sbjct 297 TGTTGATCTGGAGGAATTCCCTCTTTGTCTTG 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741379086462720