Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq7579 210 2e-49
seq188621 143 2e-29
seq194783 134 1e-26
>seq7579
Length=34747
Score = 210 bits (232), Expect = 2e-49
Identities = 540/813 (66%), Gaps = 21/813 (3%)
Strand=Plus/Plus
Query 19976 CAGATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGA 20035
||||||| |||||| ||| || || ||| | ||||| ||| | | ||| | |
Sbjct 13788 CAGATCGTACCGGAGTTGGCACTTTGTCTATCTTTGGTTGTCAAATGAGGTTTAATCTCA 13847
Query 20036 GAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGT 20095
|| || | ||||| ||||||||||| ||| ||||||| |||| ||| |||| |||||
Sbjct 13848 GAGATCAGTTTCCATTATTAACTACAAAAAGGGTATTCTGGAGAGGTGTTGCAGAAGAAC 13907
Query 20096 TATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTA---GAAAAAGGAGTTA 20152
| | ||||| || ||||| ||| ||| | | | || || |||||| || |
Sbjct 13908 TTCTTTGGTTCATCAAAGGTCAAACTAATGCCA---AAATTTTACAAGAAAAAAACGTGA 13964
Query 20153 AGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATG-GATTTGACA-ACCG 20210
| || ||| | | | | | | | |||| || | | |||| | ||| || | |
Sbjct 13965 AAATATGGGATGGAAACAGCACCAGGGAATTCTTGGATA--AATGTGGTTTTACTGATAG 14022
Query 20211 TCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATA 20270
|||| ||||||||||| || || |||||||| |||||| | |||||||| || |||||
Sbjct 14023 GGAAGAAGGGGATTTGGGGCCAGTCTATGGATTCCAATGGCGTCATTTTGGGGCAGAATA 14082
Query 20271 TG----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326
| ||| ||||| || |||| |||||||| |||||||| | |||| |
Sbjct 14083 TAAAACTTGTCATGACGAC----TATTCAAACCAAGGAGTTGATCAATTGAATGATGTCA 14138
Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386
|| | ||| || | || || | |||||||| || | | | || |||||| |
Sbjct 14139 TTCAAAGAATCAAGAATAATCCTACGGACAGAAGGATCTGTATGTCAGCTTGGAACCCAG 14198
Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCT 20445
||| | || |||||| || || || |||||| || | ||| |||||||| |||
Sbjct 14199 TGGATCTTCCAAAAATGGCATTACCACCTTGTCAT-TGTTTTGCTCAATTTTATGTTCAA 14257
Query 20446 AATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCT 20505
|| |||| || || ||| ||||| ||| | || |||||| | || || || || |||
Sbjct 14258 GATGATGAGTTATCATGTTTGATGTACCAAAGGTCTGCTGATGTTGGGCTCGGAGT-CCT 14316
Query 20506 TTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565
||||||||||||||||| || | | || ||||||||||| ||| | | | | |||
Sbjct 14317 TTCAATATTGCAAGTTACGCTTTATTGACTTATATGATTGCTCATCTCTGTGGTCTCAAA 14376
Query 20566 ACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCT 20625
|| ||||| || |||| | || ||| | ||| | || |||||| | || |||
Sbjct 14377 GTTGGAGACTTTGTTCACAGTTTTGGGGACACTCATGTCTATAAGAATCATGTTGATCCT 14436
Query 20626 TTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACT 20685
|| ||| |||| | | | || |||| || ||||||| || ||||| || |
Sbjct 14437 TTGAAAGAACAGCTTAAAAGAGTTCCAAGACCTTTCCCAAAGCTGATCATTAACCGTAAA 14496
Query 20686 GTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCAT 20745
|| | | || | || || ||| ||| ||||| | |||||||| |||| ||
Sbjct 14497 GTCGAGAAAATCGAGGACTTCAAATTTGAAGATTTCACTATTGAAGGTTACGATCCATAT 14556
Query 20746 AATTCAATTCCAATGGAAATGTCTGTTTAATAT 20778
| ||| |||||||||| | |||||||||
Sbjct 14557 CCAACTATTAAAATGGAAATGGCCGTTTAATAT 14589
>seq188621
Length=750
Score = 143 bits (158), Expect = 2e-29
Identities = 281/410 (69%), Gaps = 14/410 (3%)
Strand=Plus/Plus
Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272
|||| || || ||||| || || ||||| ||||||||| | |||||||| ||||||||
Sbjct 262 AAGAAGGAGACTTGGGACCAGTATATGGCTTTCAATGGCGTCATTTTGGGGCTGAATACA 321
Query 20273 ----TTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATT 20328
||| ||||| | |||| ||| |||| || || || ||| |||| ||
Sbjct 322 AAACTTGTCATGATGA----TTATACTGGCAAAGGCGTTGACCAGTTAAGCCATGTAATC 377
Query 20329 AATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGC--GCCTGGAACGCTA 20386
| ||||||||| || ||||| |||||||| ||| | ||| || ||||| ||
Sbjct 378 CACACAATTAAAACCAATCCAAATGACAGAAGGATT--TGCATGACAGCTTGGAATCCTG 435
Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCT 20445
|| | ||| |||||| | || |||||||||| | | || || ||||| |||
Sbjct 436 TGGACATCCCTAAAATGGCCCTTCCACCATGTCATA-GTTTTGTACAGTTTTATGTTCAA 494
Query 20446 AATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCT 20505
||| ||| | || ||| |||| ||| || | | ||||||||| |||| |||||
Sbjct 495 AATGGAGAACTTTCTTGTTCTTTGTACCAAAGAGCTGGTGATATGGGTTTGGGAGTTCCA 554
Query 20506 TTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565
||||||||||| || |||| || | || |||||||||| ||||| | |||| |
Sbjct 555 TTCAATATTGCCAGCTATGTTTTGTTAACTCATATGATTGCTCATGTCTGTAACTTAAGA 614
Query 20566 ACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCA 20615
||||| || ||||| | ||| ||||| | || ||||| |||||
Sbjct 615 GTTGGTGATTTTGTCCATAACATTGGAGATACTCACGTTTACAAGAATCA 664
>seq194783
Length=813
Score = 134 bits (148), Expect = 1e-26
Identities = 387/581 (67%), Gaps = 16/581 (3%)
Strand=Plus/Minus
Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102
|||||| || || || || ||| | || || |||| | || |||||||| | || ||
Sbjct 697 ATTTCCTTTGTTGACCACAAAAAGAGTCTTCTGGAGGGCTGTAGTTGAAGAACTGTTGTG 638
Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAG 20162
|||| | | ||| ||| ||| || | ||| ||| || ||||||| ||||
Sbjct 637 GTTTGTGAGAGGTCAAACTAATGTTAAGGTACTTCAAGACAAGAACATTAAGATCTGGAA 578
Query 20163 CGCACATGGATCTAAGCAATTT-TTACACAGCAATG-GATTTGACA-ACCGTCAAGAGGG 20219
| || | | ||| |||| ||| | | |||| | | | ||| || | |||| ||
Sbjct 577 TGACAATTGCAC-AAGAGATTTCTTAGATA--AATGTGGTCTTACAGACAGAGAAGAAGG 521
Query 20220 GGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACAT 20279
|| ||||| || || ||||| ||||||||| | ||||| || |||||||| || |
Sbjct 520 AGACTTGGGACCAGTATATGGCTTTCAATGGCGTCATTTCGGGGCTGAATACAAA-ACTT 462
Query 20280 GAACACAA--ATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337
| ||| | ||||| |||| |||| || || || || ||||| || | ||||
Sbjct 461 GT-CACGACGATTATACTGGAAAAGGCGTTGACCAGTTGAGCAATGTAATCCACACAATT 403
Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGC--GCCTGGAACGCTAAAGATGTGC 20395
||||| || ||||| |||||||| ||| | ||| || ||||| || || | |
Sbjct 402 AAAACCAATCCAAATGACAGAAGGATT--TGCATGACAGCTTGGAATCCTGTGGACATTC 345
Query 20396 CTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATGAA 20454
| |||||| | || |||||||||| | | || || ||||| ||| ||| ||
Sbjct 344 CAAAAATGGCCCTCCCACCATGTCATA-GTTTTGTACAGTTTTATGTTCAAAATGGAGAG 286
Query 20455 TTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATT 20514
| || ||| |||| ||| || | | ||||||| | || ||||| |||||||||
Sbjct 285 CTTTCTTGTTCTTTGTACCAAAGAGCTGGAGATATGGCTTTAGGAGTTCCATTCAATATT 226
Query 20515 GCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGAC 20574
|| || ||||| || | || |||||||||| ||||| |||||| | |||||
Sbjct 225 GCCAGCTATGCTTTGTTAACTCATATGATTGCTCATGTCTGTAATTTAAGAGTTGGTGAT 166
Query 20575 TTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCA 20615
|| ||||| | ||| ||||| | || ||||| |||||
Sbjct 165 TTTGTCCATAACATTGGAGATACTCACGTTTACAAGAATCA 125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398059972827745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |