Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq188621 107 3e-18 >seq188621 Length=750 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 15/197 (8%) Strand=Plus/Plus Query 104550 AGCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCTCCTTGTCATTGTATAGCACA 104609 ||||||||| || ||| | |||||||||| ||||| || |||||| || | | ||| Sbjct 422 AGCTTGGAATCCTGTGGACATCCCTAAAATGGCCCTTCCACCATGTCATAGTTTTGTACA 481 Query 104610 TTTTGATGTAAGTTCAAAAATAAATGGTAAAAGAGAATTGTCTTGTCATTTATTTCAAAG 104669 ||| |||| |||||| ||| |||| | |||||| ||| | ||||| Sbjct 482 GTTTTATGT----TCAAAA-----TGG------AGAACTTTCTTGTTCTTTGTACCAAAG 526 Query 104670 ATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCAAGTTATGCATTATTAACACA 104729 | ||| |||||||| ||||||||||| || || || || || |||| || ||||| || Sbjct 527 AGCTGGTGATATGGGTTTGGGAGTTCCATTCAATATTGCCAGCTATGTTTTGTTAACTCA 586 Query 104730 TATAATAGCTCATGTCT 104746 ||| || |||||||||| Sbjct 587 TATGATTGCTCATGTCT 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 677851087515120