Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 273 2e-68
seq229830 168 6e-37
seq160753 120 3e-22
>seq54449
Length=2482
Score = 273 bits (302), Expect = 2e-68
Identities = 591/871 (68%), Gaps = 31/871 (4%)
Strand=Plus/Plus
Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165
||||| || || || ||||| || || || || ||||| || || | ||| ||||| ||
Sbjct 269 TTGTCAACAGTGAATTGTATAGCATTGGCAGCGGGTTTTGTACGTAAATAGTACATTCCT 328
Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG- 22224
|| |||||||||| ||||| ||||| ||||| || || || ||||||||||| | ||
Sbjct 329 GTTTTCAGACCCAATTTCCAAGCGTAGAAATGCATTGAAGTTAATTTTCCATAGTTTGGT 388
Query 22225 -CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283
| | |||| | | ||||| |||||||| ||||| ||||| || |||| ||| || |
Sbjct 389 TCTGCTACATGAATA--TTGAATGACTGACTTTGATCAATAAAAGCACCTCTATCAGCAG 446
Query 22284 CCATAT---TTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340
|||| | || | || || || || |||||||| || || || || |||| ||||
Sbjct 447 CCATTTGAATTGTAGATTTA---ATGGATATTTCCCAAACAGTTTTATAAAGTTCTCTGA 503
Query 22341 TCTCTAACGGTATCGATTCGATCCTCTGGACGGACCC--GTTATTGTGTATGATCAAATT 22398
| | | || || |||||| || | || || ||| ||| || || ||
Sbjct 504 TATGTGCTGGAATTCTTTCGATTTCTTGTATAGAACCACGTT-TTGAA-ATAATTTCGTT 561
Query 22399 TTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCAC 22458
||| || ||||| ||| ||| | | | || || || |||| || ||| |||| ||
Sbjct 562 TTTCATATCATCGTCCCATAAATCAAGCTCTGTTAAGTCCTTGAGCAAATGGTGGTTTAC 621
Query 22459 CACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAA 22518
||||| ||||| || || || || || || | ||||| || || || | ||||||||
Sbjct 622 AACTTGGAACTCACCAGATAATACTCGACGGTTATAAATATTTGAAGTATATGGTTCGAA 681
Query 22519 AGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAG 22578
|||||||||||||||| || ||||| || ||||| || ||||| || || | || ||
Sbjct 682 TGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTTGGCATTGGTGCAATCAATAA 741
Query 22579 CGAGTTTCTCAAGCCGTG---CTTTGAAATTTTA--CTCTTGAGCATCGACCAGTCCCAC 22633
|| ||||| | || || |||| |||||| || | |||| | ||| ||||||
Sbjct 742 TGAATTTCTTACTCCATGAACCTTT---ATTTTATCCTTTAGAGCTT--GCCAATCCCAC 796
Query 22634 AGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGG 22693
| ||| | || || |||||||||||||| ||||| || | || || | |||
Sbjct 797 AAATCAGTTGGGGT---TTTGTCCCACATATCATATTGTAAGATTCCTTTGCTAACTGGG 853
Query 22694 CTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAAC 22753
|| || || || ||||| || | ||| | | | | |||||||| || || || || |
Sbjct 854 CTTCCCTCATATGTTTCATAAGTACCCTCTTTTTCAGCAAGTTCACAACTTGCTTCAAGA 913
Query 22754 GCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGC--GACGCTTT 22811
|| || ||||| || ||||| || |||| || || | | | | | | | ||||
Sbjct 914 GCTCCATAATAAATTGTCTCAAATATTTGCTGATT--AAGCAACTGAGCCTTTTCACTTT 971
Query 22812 CGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCG 22871
|||| || |||||| | | || || || | | ||| || || || || ||||| |
Sbjct 972 CGTAAGGATAACGCATAAGAATCAAAGCATCAGAGAAACCTTGTACACCGATCCCGATAG 1031
Query 22872 GTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTG 22931
| | || | ||| ||| | | || || ||||| ||||| |||| ||| |||
Sbjct 1032 GCCTGTGACGTAAATTTGACTTTCTAGCTTCAGGCAATGGATAATAATTAACATCTATTA 1091
Query 22932 TTCTGTTCAAGTTTCTGGTCACAATTTTCGT 22962
|| |||| || |||||||| | |||||| ||
Sbjct 1092 TTTTGTTTAAATTTCTGGTTATAATTTTTGT 1122
Score = 219 bits (242), Expect = 4e-52
Identities = 639/973 (66%), Gaps = 17/973 (2%)
Strand=Plus/Plus
Query 23066 TACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTG 23125
|||||||| ||||| || || ||||| |||||||| || || || | ||| || ||
Sbjct 1330 TACTCTACGATTTCAGTGCAGAGATTACTACACTTAATTGTACCAACATTTTGTTGATTA 1389
Query 23126 CTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGAC 23185
|| |||| ||||| | ||| ||||| | ||| || || || || || || || || |||
Sbjct 1390 CTCTTTCTGTTGCAAGCATCTTTGTACAACATATATGGAGTTCCAGTTTCTACTTGTGAC 1449
Query 23186 TCGATGATCGCTCGCCACA-TAGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTT 23243
|| || || || ||| | | || ||||| | | || | | | ||||| |
Sbjct 1450 TCAATAATTGCATACCAGAGTTGT-TGAGCTTTTATTT-TCCTGTTTGCTTTTCCTTCAT 1507
Query 23244 CCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCG 23303
|| ||||| || | |||||||| |||| || ||| || |||||
Sbjct 1508 TTTCATACTTAATATAGAGTTTCTCAAATTCTTCACCCCAAACATCGTGCAATCCGGGAC 1567
Query 23304 ATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGAT 23363
||| |||||||| ||| ||| | |||| ||||| ||| ||||||| | ||
Sbjct 1568 ATTTGTGAGGACACATAAGAGACCAATCTTCGTCAGCCTCAACACGTTTCATAAACAAAT 1627
Query 23364 CCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCT 23423
| || ||||||| ||||||||| || || | || || ||| ||||| || ||||| |
Sbjct 1628 CTGGAATCCATAAAGCGTAGAAAAGATCTCTAGCTCGGTTCTCTTCTTTTCCTGTGTTTT 1687
Query 23424 TTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACG 23483
| |||||||||||||| || || | || | |||||| || || | |||| || || |
Sbjct 1688 TCTTCAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAATAAATTGCGAATG 1747
Query 23484 CGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTA 23543
| || || ||||| ||||| || ||||| || || ||||| || ||| | |||||||
Sbjct 1748 CTCCAGGCCTCTTGTTGCCTCCTTGATCTACATATCGGGCAACATTATTGAAGACTCTTA 1807
Query 23544 GCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTC 23603
||| || || | ||| || || | || || || | | | ||||| || |
Sbjct 1808 ACATGGGAACTAAACCATTTGAAGTTCCATTAGTTCCAGCAATAGCTGTCCCTTTAGCCC 1867
Query 23604 GAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTT 23663
||| ||| || | || || || || || | || || || ||||| || |||||||
Sbjct 1868 GAATACAGTGTACATTTAATCCGATTCCGCCTGCAGACTTGGAAATCATAGCACATTGTT 1927
Query 23664 TCAGAGTGTCGTAGATGCCCTCGATG----CTGTCCTCTTTGGTCGCGACCAAG-AAACA 23718
| | | | |||| || || ||| ||| | | ||| | | ||| |||||
Sbjct 1928 CAACGGACTTGAAGATCCCTTCTATGGAATCTGAGCACATTGTTAG-----AAGAAAACA 1982
Query 23719 CGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAA 23778
||||||| ||| | | || || || || | || | || || |||||| ||||
Sbjct 1983 TGAAGACAATTGAGGCCTTGGTGTGGCAGCAGCAAATAACGTTGGAGAGGCGTGAATAAA 2042
Query 23779 GTATCCATTC-GACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTA 23837
|| || ||| || | ||||| || || || || || ||||| ||||| | ||| || |
Sbjct 2043 ATA-CCTTTCAGATAAAAGATTATATGTCTCAATAGCTGCATCTATGTCGTTTCCATGAA 2101
Query 23838 TACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTT 23897
| || | ||||| | ||| | ||||| ||||||||| || | | || || || |
Sbjct 2102 TTCCTACAGCGACTCTCATAAGCATGTGTTGAGGTCTTTCAGCAATTTTTCCATTTATCT 2161
Query 23898 TGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGAT 23957
| || |||||||| || | || |||||||||||||| || | || | || | | ||
Sbjct 2162 TCAAAAGATATGAGCGCTCCAATGTTTTAAATCCAAAGTAATTGTA-TCCAAAACTCTAT 2220
Query 23958 CGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTGTAATGAAAAT 24017
| | | || | ||||||||||| | || || | || | | |||||| ||||
Sbjct 2221 CATAAATGATAGATGAATTCAAACGCTCAGCGTTTTTAATGACCACATCGTAATGGAAAT 2280
Query 24018 TCGATATCATCGG 24030
|||||||| ||
Sbjct 2281 CTGATATCATTGG 2293
>seq229830
Length=7395
Score = 168 bits (186), Expect = 6e-37
Identities = 169/217 (78%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
|| || ||||| |||||||| |||||| |||| || ||||| || ||| | || ||||||
Sbjct 5553 TCCAATATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAA 5612
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| ||||| | | | |||| || ||| | ||| |||||||||||| | || ||
Sbjct 5613 CCATCCGATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCA 5672
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGA 31365
|||||||| ||| | || |||||||||||||| |||||||| | | | ||| |||||||
Sbjct 5673 GACCAGCAACGTTTGATCTTCGCTGGCAAACAATTGGAAGA-TGGACGCACTTTGAGCGA 5731
Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402
||| ||||||||||||||||| || ||||| |||||
Sbjct 5732 TTACAACATTCAAAAAGAATCAACCCTTCACTTGGTA 5768
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || || |||| || ||||| ||||| | || ||||| || ||
Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| || || | || ||||| ||||| | || || || ||
Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||| | || || ||||||||||| ||||||||| || || || ||||||
Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCAGACTATAAC 5966
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||||||||| || || ||| | ||| | | || || || ||||
Sbjct 5967 ATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGAGGTA 6015
Score = 86.0 bits (94), Expect = 6e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344
||||||||||||| | || || || || |||||||| || || || || || ||| | ||
Sbjct 31 GGACAAGGAAGGCATTCCTCCAGATCAACAGCGTCTCATTTTTGCCGGAAAGCAGCTCGA 90
Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
||| ||| | ||||| |||||||||||||||||||| ||||| || ||||
Sbjct 91 AGATGGCCGCACTCTTAGCGACTATAACATTCAAAAAGAATCTACTCTCCACTTGGT 147
>seq160753
Length=592
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || |||| |||||||| |||||| | || |||||||| ||
Sbjct 591 ATGCAGATCTTCGTCAAAACCTTGACTGGCAAAACTATCACCCTTGAAGTTGAACCATCT 532
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| ||||| | || ||| || ||||| | || || || |||
Sbjct 531 GACACAATTGAAAACGTCAAGGCTAAGATCCAGGATAAAGAAGGAATCCCTCCAGATCAG 472
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATAA 31371
|| ||| | || |||||||||||||| |||||||| | | | || | | ||||||||
Sbjct 471 CAACGTTTGATCTTCGCTGGCAAACAATTGGAAGA-TGGACGCACATTATCAGATTATAA 413
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||| ||||| || || |||||||| |||| ||| | || | || ||||
Sbjct 412 CATCCAAAAGGAGTCAACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGTA 363
Score = 102 bits (112), Expect = 7e-17
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || ||| |||| || ||||| |||||| | || ||||| || ||
Sbjct 363 ATGCAGATTTTCGTCAAAACTTTGACTGGAAAAACTATCACCCTTGAAGTTGAGCCATCA 304
Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || |||| | | | ||| | | | |||||||| | || || || ||
Sbjct 303 GACACCATTGAGAACGTTAAGGCTAAGATTCAAG-ATAAGGAAGGTATCCCTCCAGATCA 245
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|| ||| | || ||||| || || ||||||||||| | | | || || |||||||
Sbjct 244 ACAACGTTTGATCTTCGCCGGAAAGCAGTTGGAAGA-TGGACGCACATTGTCAGATTATA 186
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402
|||||||||| || || || |||||| |||||
Sbjct 185 ACATTCAAAAGGAGTCAACCCTTCATTTGGTA 154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444479021064720
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