Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq188621 161 2e-34
seq194783 149 1e-30
seq7579 141 2e-28
>seq188621
Length=750
Score = 161 bits (178), Expect = 2e-34
Identities = 327/477 (69%), Gaps = 10/477 (2%)
Strand=Plus/Plus
Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282
|||| | || || || || | | | |||||||| | || || |||||||| | |||||
Sbjct 94 TTCCTTTGCTGACCACTAAAAGAGTCTTCTGGAGGGCTGTAGTTGAAGAACTGTTGTGGT 153
Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGA--AGAAGATACACATCTGGAA 35340
| | || || | || | | || | | | ||||| |||| || | ||||||||
Sbjct 154 TTGTGAGAGGTCAAACCAATGTGAAGGTACTT--CAAGACAAGAACATTAAGATCTGGAA 211
Query 35341 CGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATAC-GATAGAGCAGAGGGAG 35399
| |||| | | | || || || || | | || | ||| ||||||| ||| ||||
Sbjct 212 TGATAATTGCACAAGAGATTTCTTAGATAAATGTGGTCT-TACAGATAGAGAAGAAGGAG 270
Query 35400 ATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTT 35459
| |||||||| ||||| || || ||||||||||||||||| |||||||| | || |||
Sbjct 271 ACTTGGGACCAGTATATGGCTTTCAATGGCGTCATTTTGGGGCTGAATACAAAACTTGTC 330
Query 35460 CTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAG 35519
| ||||||||||| || || |||| || || | || || | | || | | |
Sbjct 331 ATGATGATTATACTGGCAAAGGCGTTGACCAGTTAAGCCATGTAATCCACACAATTAAAA 390
Query 35520 AAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCT-- 35577
|||||| |||| |||||||| ||||| || ||||||||| |||| | || |||
Sbjct 391 CCAATCCAAATGACAGAAGGATTTGCATGACAGCTTGGAATCCTGTGGA-CATC-CCTAA 448
Query 35578 TATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTC 35637
||||| ||||| ||||| || | || || |||||||| ||||||||| | ||
Sbjct 449 AATGGCCCTTCCACCATGTCATAGTTTTGTACAGTTTTATGTTCAAAATGGAGAACTTTC 508
Query 35638 GTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694
|| ||||| || || || ||| | || ||||| || || |||||||||||
Sbjct 509 TTGTTCTTTGTACCAAAGAGCTGGTGATATGGGTTTGGGAGTTCCATTCAATATTGC 565
>seq194783
Length=813
Score = 149 bits (164), Expect = 1e-30
Identities = 305/449 (68%), Gaps = 6/449 (1%)
Strand=Plus/Minus
Query 35249 TTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAA 35308
|||||||| | || || |||||||| | |||||| | || || | || | | ||
Sbjct 669 TTCTGGAGGGCTGTAGTTGAAGAACTGTTGTGGTTTGTGAGAGGTCAAACTAATGTTAAG 610
Query 35309 GAATTGGCCAAGA--AGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGG 35366
| | | ||||| |||| || | |||||||| | ||| | | | || || || |
Sbjct 609 GTACTT--CAAGACAAGAACATTAAGATCTGGAATGACAATTGCACAAGAGATTTCTTAG 552
Query 35367 ACAGTAGAGGGTTATAC-GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAA 35425
| | | || | ||| || |||| ||| ||||| |||||||| ||||| || || |||
Sbjct 551 ATAAATGTGGTCT-TACAGACAGAGAAGAAGGAGACTTGGGACCAGTATATGGCTTTCAA 493
Query 35426 TGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATT 35485
||||||||||| || |||||||| | || ||| ||||||||||||||| || ||
Sbjct 492 TGGCGTCATTTCGGGGCTGAATACAAAACTTGTCACGACGATTATACTGGAAAAGGCGTT 433
Query 35486 GATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATT 35545
|| || ||| |||| || | | || | | | |||||| |||| ||||||||
Sbjct 432 GACCAGTTGAGCAATGTAATCCACACAATTAAAACCAATCCAAATGACAGAAGGATTTGC 373
Query 35546 ATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACT 35605
||||| || ||||||||| |||| ||| ||||| || || ||||| || | |
Sbjct 372 ATGACAGCTTGGAATCCTGTGGACATTCCAAAAATGGCCCTCCCACCATGTCATAGTTTT 313
Query 35606 GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGAT 35665
| || |||||||| |||||||| | || || ||||| || || ||||||
Sbjct 312 GTACAGTTTTATGTTCAAAATGGAGAGCTTTCTTGTTCTTTGTACCAAAGAGCTGGAGAT 253
Query 35666 GTCGGGTTGGGCGTGCCCTTCAATATTGC 35694
| | || || || || |||||||||||
Sbjct 252 ATGGCTTTAGGAGTTCCATTCAATATTGC 224
>seq7579
Length=34747
Score = 141 bits (156), Expect = 2e-28
Identities = 453/688 (66%), Gaps = 16/688 (2%)
Strand=Plus/Plus
Query 35168 GGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCA 35227
|| ||| | || || ||||| ||||||||||| ||| |||| || | |||||
Sbjct 13805 GGCACTTTGTCTATCTTTGGTTGTCAAATGAGGTTTAATCTCAGAGAT--CAGT-TTCCA 13861
Query 35228 GTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATC 35287
| | ||||| || | | ||||||||||| |||| |||||||| |||||||||
Sbjct 13862 TTATTAACTACAAAAAGGGTATTCTGGAGAGGTGTTGCAGAAGAACTTCTTTGGTTCATC 13921
Query 35288 AGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGA--TACACATCTGGAACGCTA 35345
| || | || | |||||| ||| |||||| || | | | || ||| | | |
Sbjct 13922 AAAGGTCAAACTAATGCCAAA--ATTTTACAAGAAAAAAACGTGAAAATATGGGATGGAA 13979
Query 35346 ATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATAC-GATAGAGCAGAGGGAGATTTG 35404
| | | ||||||| ||||| | | || || ||| ||||| | ||| || ||||||
Sbjct 13980 ACAGCACCAGGGAATTCTTGGATAAATGTGGTTT-TACTGATAGGGAAGAAGGGGATTTG 14038
Query 35405 GGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCC 35464
|| || || || ||||||||||||||||||||||| || |||||| | || ||| | |
Sbjct 14039 GGGCCAGTCTATGGATTCCAATGGCGTCATTTTGGGGCAGAATATAAAACTTGTCATGAC 14098
Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACT--AAAGACCCTGAGAGAAA 35522
|| ||| | | || ||||||||||| || | | ||||| | ||| | |
Sbjct 14099 GACTATTCAAACCAAGGAGTTGATCAATTGAATGATGTCATTCAAAGAATC-AAGA-ATA 14156
Query 35523 ATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGG 35582
|||| || |||||||| |||| | || ||||| || ||||||||| ||||
Sbjct 14157 ATCCTACGGACAGAAGGATCTGTATGTCAGCTTGGAACCCAGTGGATCTTCCAAAAATGG 14216
Query 35583 CTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCC 35642
| | || || || || ||||||||||||||| ||| || || || ||
Sbjct 14217 CATTACCACCTTGTCATTGTTTTGCTCAATTTTATGTTCAAGATGATGAGTTATCATGTT 14276
Query 35643 AGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACT 35702
| |||| || | | ||||| ||| | || || || |||||||||||| |||
Sbjct 14277 TGATGTACCAAAGGTCTGCTGATGTTGGGCTCGGAGT-CCTTTCAATATTGCAAGTTACG 14335
Query 35703 CTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCA 35762
|| | ||||| || |||| || | | ||||| ||| ||||| ||| | | ||
Sbjct 14336 CTTTATTGACTTATATGATTGCTCATCTCTGTGGTCTCAAAGTTGGAGACTTTGTTCACA 14395
Query 35763 CTCTTGGTGACGCACACATTTATAATACCCACATTGA-GGTGTTAAAGAAGCAGTTGTGC 35821
| |||| ||| | || | ||||| | || |||| | | |||||| ||| |
Sbjct 14396 GTTTTGGGGACACTCATGTCTATAAGAATCATGTTGATCCTTTGAAAGAA-CAGCTTAAA 14454
Query 35822 CGCGTCCCTAGACCATTCCCTAAGTTGA 35849
| || || ||||| ||||| ||| |||
Sbjct 14455 AGAGTTCCAAGACCTTTCCCAAAGCTGA 14482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 986654620764155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |