Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq188621 161 2e-34 seq194783 149 1e-30 seq7579 141 2e-28 >seq188621 Length=750 Score = 161 bits (178), Expect = 2e-34 Identities = 327/477 (69%), Gaps = 10/477 (2%) Strand=Plus/Plus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282 |||| | || || || || | | | |||||||| | || || |||||||| | ||||| Sbjct 94 TTCCTTTGCTGACCACTAAAAGAGTCTTCTGGAGGGCTGTAGTTGAAGAACTGTTGTGGT 153 Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGA--AGAAGATACACATCTGGAA 35340 | | || || | || | | || | | | ||||| |||| || | |||||||| Sbjct 154 TTGTGAGAGGTCAAACCAATGTGAAGGTACTT--CAAGACAAGAACATTAAGATCTGGAA 211 Query 35341 CGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATAC-GATAGAGCAGAGGGAG 35399 | |||| | | | || || || || | | || | ||| ||||||| ||| |||| Sbjct 212 TGATAATTGCACAAGAGATTTCTTAGATAAATGTGGTCT-TACAGATAGAGAAGAAGGAG 270 Query 35400 ATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTT 35459 | |||||||| ||||| || || ||||||||||||||||| |||||||| | || ||| Sbjct 271 ACTTGGGACCAGTATATGGCTTTCAATGGCGTCATTTTGGGGCTGAATACAAAACTTGTC 330 Query 35460 CTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAG 35519 | ||||||||||| || || |||| || || | || || | | || | | | Sbjct 331 ATGATGATTATACTGGCAAAGGCGTTGACCAGTTAAGCCATGTAATCCACACAATTAAAA 390 Query 35520 AAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCT-- 35577 |||||| |||| |||||||| ||||| || ||||||||| |||| | || ||| Sbjct 391 CCAATCCAAATGACAGAAGGATTTGCATGACAGCTTGGAATCCTGTGGA-CATC-CCTAA 448 Query 35578 TATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTC 35637 ||||| ||||| ||||| || | || || |||||||| ||||||||| | || Sbjct 449 AATGGCCCTTCCACCATGTCATAGTTTTGTACAGTTTTATGTTCAAAATGGAGAACTTTC 508 Query 35638 GTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 || ||||| || || || ||| | || ||||| || || ||||||||||| Sbjct 509 TTGTTCTTTGTACCAAAGAGCTGGTGATATGGGTTTGGGAGTTCCATTCAATATTGC 565 >seq194783 Length=813 Score = 149 bits (164), Expect = 1e-30 Identities = 305/449 (68%), Gaps = 6/449 (1%) Strand=Plus/Minus Query 35249 TTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAA 35308 |||||||| | || || |||||||| | |||||| | || || | || | | || Sbjct 669 TTCTGGAGGGCTGTAGTTGAAGAACTGTTGTGGTTTGTGAGAGGTCAAACTAATGTTAAG 610 Query 35309 GAATTGGCCAAGA--AGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGG 35366 | | | ||||| |||| || | |||||||| | ||| | | | || || || | Sbjct 609 GTACTT--CAAGACAAGAACATTAAGATCTGGAATGACAATTGCACAAGAGATTTCTTAG 552 Query 35367 ACAGTAGAGGGTTATAC-GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAA 35425 | | | || | ||| || |||| ||| ||||| |||||||| ||||| || || ||| Sbjct 551 ATAAATGTGGTCT-TACAGACAGAGAAGAAGGAGACTTGGGACCAGTATATGGCTTTCAA 493 Query 35426 TGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATT 35485 ||||||||||| || |||||||| | || ||| ||||||||||||||| || || Sbjct 492 TGGCGTCATTTCGGGGCTGAATACAAAACTTGTCACGACGATTATACTGGAAAAGGCGTT 433 Query 35486 GATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATT 35545 || || ||| |||| || | | || | | | |||||| |||| |||||||| Sbjct 432 GACCAGTTGAGCAATGTAATCCACACAATTAAAACCAATCCAAATGACAGAAGGATTTGC 373 Query 35546 ATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACT 35605 ||||| || ||||||||| |||| ||| ||||| || || ||||| || | | Sbjct 372 ATGACAGCTTGGAATCCTGTGGACATTCCAAAAATGGCCCTCCCACCATGTCATAGTTTT 313 Query 35606 GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGAT 35665 | || |||||||| |||||||| | || || ||||| || || |||||| Sbjct 312 GTACAGTTTTATGTTCAAAATGGAGAGCTTTCTTGTTCTTTGTACCAAAGAGCTGGAGAT 253 Query 35666 GTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 | | || || || || ||||||||||| Sbjct 252 ATGGCTTTAGGAGTTCCATTCAATATTGC 224 >seq7579 Length=34747 Score = 141 bits (156), Expect = 2e-28 Identities = 453/688 (66%), Gaps = 16/688 (2%) Strand=Plus/Plus Query 35168 GGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCA 35227 || ||| | || || ||||| ||||||||||| ||| |||| || | ||||| Sbjct 13805 GGCACTTTGTCTATCTTTGGTTGTCAAATGAGGTTTAATCTCAGAGAT--CAGT-TTCCA 13861 Query 35228 GTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATC 35287 | | ||||| || | | ||||||||||| |||| |||||||| ||||||||| Sbjct 13862 TTATTAACTACAAAAAGGGTATTCTGGAGAGGTGTTGCAGAAGAACTTCTTTGGTTCATC 13921 Query 35288 AGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGA--TACACATCTGGAACGCTA 35345 | || | || | |||||| ||| |||||| || | | | || ||| | | | Sbjct 13922 AAAGGTCAAACTAATGCCAAA--ATTTTACAAGAAAAAAACGTGAAAATATGGGATGGAA 13979 Query 35346 ATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATAC-GATAGAGCAGAGGGAGATTTG 35404 | | | ||||||| ||||| | | || || ||| ||||| | ||| || |||||| Sbjct 13980 ACAGCACCAGGGAATTCTTGGATAAATGTGGTTT-TACTGATAGGGAAGAAGGGGATTTG 14038 Query 35405 GGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCC 35464 || || || || ||||||||||||||||||||||| || |||||| | || ||| | | Sbjct 14039 GGGCCAGTCTATGGATTCCAATGGCGTCATTTTGGGGCAGAATATAAAACTTGTCATGAC 14098 Query 35465 GATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACT--AAAGACCCTGAGAGAAA 35522 || ||| | | || ||||||||||| || | | ||||| | ||| | | Sbjct 14099 GACTATTCAAACCAAGGAGTTGATCAATTGAATGATGTCATTCAAAGAATC-AAGA-ATA 14156 Query 35523 ATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGG 35582 |||| || |||||||| |||| | || ||||| || ||||||||| |||| Sbjct 14157 ATCCTACGGACAGAAGGATCTGTATGTCAGCTTGGAACCCAGTGGATCTTCCAAAAATGG 14216 Query 35583 CTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCC 35642 | | || || || || ||||||||||||||| ||| || || || || Sbjct 14217 CATTACCACCTTGTCATTGTTTTGCTCAATTTTATGTTCAAGATGATGAGTTATCATGTT 14276 Query 35643 AGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACT 35702 | |||| || | | ||||| ||| | || || || |||||||||||| ||| Sbjct 14277 TGATGTACCAAAGGTCTGCTGATGTTGGGCTCGGAGT-CCTTTCAATATTGCAAGTTACG 14335 Query 35703 CTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCA 35762 || | ||||| || |||| || | | ||||| ||| ||||| ||| | | || Sbjct 14336 CTTTATTGACTTATATGATTGCTCATCTCTGTGGTCTCAAAGTTGGAGACTTTGTTCACA 14395 Query 35763 CTCTTGGTGACGCACACATTTATAATACCCACATTGA-GGTGTTAAAGAAGCAGTTGTGC 35821 | |||| ||| | || | ||||| | || |||| | | |||||| ||| | Sbjct 14396 GTTTTGGGGACACTCATGTCTATAAGAATCATGTTGATCCTTTGAAAGAA-CAGCTTAAA 14454 Query 35822 CGCGTCCCTAGACCATTCCCTAAGTTGA 35849 | || || ||||| ||||| ||| ||| Sbjct 14455 AGAGTTCCAAGACCTTTCCCAAAGCTGA 14482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 986654620764155