Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_004305.1
Length=42259
Score E
Sequences producing significant alignments: (Bits) Value
seq139140 279 1e-70
seq125644 123 7e-24
>seq139140
Length=514
Score = 279 bits (308), Expect = 1e-70
Identities = 258/327 (79%), Gaps = 0/327 (0%)
Strand=Plus/Plus
Query 37939 ATAGCCTTCCTTGAATGGCACACGCCATTCAAACATGAAATCGATAACTAGGTCGAGGAG 37998
|||||||| ||||| || |||||||| ||||||||| ||||||||||||||||| |
Sbjct 3 ATAGCCTTGTTTGAACGGTACACGCCACGTAAACATGAAGTCGATAACTAGGTCGAGTAA 62
Query 37999 CATGTTAGCATCACTCACAGACGATTTTGTGCCATCTGACAGACTGATCTGTTTACCTGC 38058
|| ||||||||| ||||| ||||||| ||| |||||||| || || ||||| ||
Sbjct 63 CACGTTAGCATCGCTCACGGACGATTCTGTCGTGTCTGACAGGCTAATTTGTTTGCCAAA 122
Query 38059 CGTATACTCCCGATACTCCATGTAAAACAAGTCCTTCAAAAAGTCCGTTGCCATACCAGA 38118
||| || ||| ||| | || || ||||| || ||||||||||| || | ||| || ||
Sbjct 123 CGTGTATTCCTCATATTGCAGATAGAACAACTCTTTCAAAAAGTCTGTAGGCATGCCTGA 182
Query 38119 CCATGTATAAATGTCCGTCAGTAATGCAAAGAACAACCGCCGCTGCTGAGGCCTAGCTTT 38178
||| ||||||||||| |||| | |||||||| | ||||| || || |||||||| ||
Sbjct 183 CCAGGTATAAATGTCACTCAGCAGGGCAAAGAATAGTCGCCGTTGTTGTGGCCTAGCCTT 242
Query 38179 GCGTCTGTCAGCTAGTTTCCAATCCATATAAAACTGGTCACGGGACCCGCTGACGGTCTC 38238
|||| ||||||||| || |||||| | |||| |||||||| || ||||| ||||||||
Sbjct 243 GCGTGTGTCAGCTAATTCCCAATCTAGGTAAAGTTGGTCACGTGAACCGCTAACGGTCTC 302
Query 38239 TATATGATCCAAATTGGGCTTTTCGTC 38265
||||| |||||||| ||||||| |||
Sbjct 303 GATATGGTCCAAATTTGGCTTTTGGTC 329
>seq125644
Length=474
Score = 123 bits (136), Expect = 7e-24
Identities = 127/166 (77%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 37844 ACATGATGGATATCAGCACGATTACCACAGATCATGCAAACTCGATGGCGACAACACTGA 37903
|||||||| || || || || | |||||| | ||| |||||||| || |||||||||
Sbjct 193 ACATGATGAATTTCTGCTCGTTCACCACATACACAGCACACTCGATGCCGGCAACACTGA 252
Query 37904 AACAAGTAATACTCTTGTTCATGCGGCAACAGCTTATAGCCTTCCTTGAATGGCACACGC 37963
||| ||||||| || || | || | | | | |||||||| ||||| || ||||||
Sbjct 253 TACATGTAATACCTTTCCTCTCGTGGAAGCTGTTCATAGCCTTGTTTGAACGGTACACGC 312
Query 37964 CATTCAAACATGAAATCGATAACTAGGTCGAGGAGCATGTTAGCAT 38009
|| ||||||||| ||||||||||||||||| | || ||||||||
Sbjct 313 CACGTAAACATGAAGTCGATAACTAGGTCGAGTAACACGTTAGCAT 358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134736518281682
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |