Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_004313.1 Length=40149 Score E Sequences producing significant alignments: (Bits) Value seq222403 118 3e-22 >seq222403 Length=4011 Score = 118 bits (130), Expect = 3e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 5320 ATGCCGGATATCGCCGCCGATGCGAAAGCCATTGCGTTTGGTAACTTCAAACGGGGTTAC 5379 ||||||||||| || || || | |||||||||| || || ||||| |||| ||| Sbjct 293 ATGCCGGATATTGCAGCAAGCGCTATCCCCATTGCGTTCGGCAATTTCAAGCGGGCCTAC 234 Query 5380 ACCATCGTTGACCGTATCGGCACCCGCATCCTGCGCGACCCGTACACCAACAAACCGTTT 5439 | ||||| |||||||| |||| ||| | || || || || ||||||||||| |||||| Sbjct 233 ATGATCGTGGACCGTATTGGCATCCGGACGCTTCGGGATCCCTACACCAACAAGCCGTTT 174 Query 5440 GTCGGTTTTTATACCACCAAGCGCACCGGGGGTAT 5474 || || ||||| ||||||| |||||||| || || Sbjct 173 GTTGGGTTTTACGCCACCAAACGCACCGGTGGGAT 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128003043149062