Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq229830 111 1e-19
seq80618 102 5e-17
seq160753 86.0 4e-12
>seq229830
Length=7395
Score = 111 bits (122), Expect = 1e-19
Identities = 164/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| ||||| | || || || ||||| | ||| || |||||||| || || || || ||
Sbjct 6014 ACCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGA 5955
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
||| || || ||| |||||||| || ||| ||| || |||||||| || || | ||
Sbjct 5954 CAATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGG 5895
Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
|| |||||||| || ||| |||| | || ||| ||| ||||| || |
Sbjct 5894 AATACCTTCTTTGTCTTGGATCTTGGCCT---TAACGTTTTCAATTGTGTCAGAAGGCTC 5838
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||| |||| || || |||||||| || | ||||| ||||||||||||||
Sbjct 5837 AACTTCCAATGTGATGGTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCAT 5787
Score = 109 bits (120), Expect = 3e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| ||||| || | || || |||||||| || |||||||| |||| || ||
Sbjct 5773 CGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAAAGTGCGTCCA 5714
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||||||| || ||| || || |||||||||||||| | ||| || ||||| ||
Sbjct 5713 TCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCCTTCCTTG 5654
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| ||| ||| || ||| ||| || ||| |||| ||| |||| || ||
Sbjct 5653 TCCTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAAGGTAATT 5594
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
||||| || || | ||| || |||||||| ||||| ||
Sbjct 5593 GTTTTACCAGTCAAAGTCTTGACGAAAATCTGCATATT 5556
>seq80618
Length=357
Score = 102 bits (112), Expect = 5e-17
Identities = 154/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| || | || || || ||||| || ||||| || ||||| || ||
Sbjct 338 CGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCA 279
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273
|| |||||||||||||| || || |||||||| || || | || || ||||||||
Sbjct 278 TCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTG 219
Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| | | | ||| || || ||| ||| |||||| |||| ||| |||| ||
Sbjct 218 TCTTGGATCTTGGCC---TTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTA 162
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || || | ||| || |||||||| |||||
Sbjct 161 ATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 124
>seq160753
Length=592
Score = 86.0 bits (94), Expect = 4e-12
Identities = 147/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220
||||| || | || ||||| ||||| || || ||||| || || || || || |||
Sbjct 383 ACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGTGCGTCCATCTTCC 442
Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---G 33277
||||| || ||| || || ||||||||||| || | || || |||||||| || |
Sbjct 443 AATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGG 502
Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337
| | ||| || || ||| ||| ||||| |||| ||| || || || || |||
Sbjct 503 ATCTTAGCC---TTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGATAGTT 559
Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || | ||||| ||||| || |||||
Sbjct 560 TTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 317879982148818
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |