Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq38155 131 2e-25
seq188621 102 1e-16
>seq38155
Length=21922
Score = 131 bits (144), Expect = 2e-25
Identities = 223/322 (69%), Gaps = 6/322 (2%)
Strand=Plus/Plus
Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842
||||||| |||| || ||||| ||||| | ||||| || ||||| ||| || || |
Sbjct 13333 TTCATGACACAGTTGTCAATCAATTGCTGGCCAAAATTGACGGTGTGGAACAGTTGAACA 13392
Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902
| ||| || | | || |||||||| || | |||| | |||||||| |||||| | ||||
Sbjct 13393 ACATTCTAGTCATTGGAATGACCAATCGTCGTGATATGATTGATGAAGCTTTACTTCGAC 13452
Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAA 164962
||||||| || ||| | |||| ||||| | ||||| | | || || | ||||
Sbjct 13453 CTGGTCGCTTGGAAGTACAAATGGAAATTAGTTTACCGAATGAGTCTGGTCGTGTACAAA 13512
Query 164963 TTTTAAAAGTTCATGTGGCTAAA---ATGAAATCCTGTGATATATTATCTCCCGATGTAG 165019
|||| || ||||| | ||| |||| | | | ||| | | ||||||||||
Sbjct 13513 TTTTGAATATTCAT---ACAAAACGTATGAGAGAGTTTAATAAGATTGCCCCCGATGTAG 13569
Query 165020 ATTTAAATAAAATAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAG 165079
|| || |||| ||| | ||||| |||| || ||||||||| | || || ||||
Sbjct 13570 ATAATAAGGAAATTGCTTCTATGACTAAGAATTTCAGCGGTGCTGAACTTGAAGGTTTAG 13629
Query 165080 TAAGAGCCGCTCAATCAACCGC 165101
| || || || ||||| |||||
Sbjct 13630 TCAGGGCAGCCCAATCCACCGC 13651
Score = 118 bits (130), Expect = 1e-21
Identities = 215/312 (69%), Gaps = 6/312 (2%)
Strand=Plus/Plus
Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452
||||| | |||| |||||||| | ||||| | || ||||| | |||||||
Sbjct 12872 ATTGGGACTTTGGTAAAATGGGAATTGGTGGTTTGGACAAGGAATTCAATGCTATTTTCC 12931
Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512
| || |||||||| ||| || | |||| ||| || | || |||| || || || |
Sbjct 12932 GTCGTGCATTTGCATCTCGAGTATTTCCACCAGAATTAGTTGAACAATTGGGTTGCAAGC 12991
Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572
| | ||||||||||| ||| |||| || || || |||||||| ||||||||| ||
Sbjct 12992 ACGTTAAAGGAATTTTGTTATATGGTCCACCAGGAACTGGTAAAACTTTAATGGCTAGAC 13051
Query 164573 GCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629
|||| || | ||||| ||| || || || ||||| |||||||| || |
Sbjct 13052 AAATTG-GAAATATGTTAAATGCTCGTGAACC--CAAGATTGTCAATGGTCCACAAATCC 13108
Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689
|| ||||||| || ||||| || ||||| ||| | ||| | | || || ||||| |
Sbjct 13109 TGGACAAATACGTTGGTGAATCTGAAGCCAATATCCGAAGGCTTTTCGCTGAAGCTGAGG 13168
Query 164690 AAGAACAAAAGA 164701
||||| ||||||
Sbjct 13169 AAGAAGAAAAGA 13180
>seq188621
Length=750
Score = 102 bits (112), Expect = 1e-16
Identities = 273/407 (67%), Gaps = 24/407 (6%)
Strand=Plus/Minus
Query 6841 TAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAG-CTTG 6899
|||| |||| |||||| | |||| | ||| ||||| | | | | | ||| | ||
Sbjct 655 TAAACGTGAGTATCTCCAATGTTATGGACAAAATCACCAACTCTTAAGTTA-CAGACATG 597
Query 6900 AGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCAT 6959
|||||| | || ||||| || |||| || | ||| || || || || || |||||
Sbjct 596 AGCAATCATATGAGTTAACAAAACATAGCTGGCAATATTGAATGGAACTCCCAAACCCAT 537
Query 6960 ATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTAT----AGCATAAAATT 7015
||| | | |||||| || | |||||| | || || || | ||||||| |
Sbjct 536 ATCACCAGCTCTTTGGTACAAAGAACAAGAAAG----TTCTCCATTTTGAACATAAAACT 481
Query 7016 GACACAATAC-ATGACATGGAGGTAAAACAGCC---TGATCTATATCAGATGGATTCCAA 7071
| |||| || ||||||||| || || ||| | | || || |||||||||
Sbjct 480 GT-ACAAAACTATGACATGGTGG---AAGGGCCATTTTAGGGATGTCCACAGGATTCCAA 425
Query 7072 GCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTG- 7130
|| ||||| |||| | ||| ||||||||| ||| |||||||| ||| |||| ||
Sbjct 424 GCTGTCATGCAAATCCTTCTGTCATTTGGA-TTGGTTTTAATTGTGT--GGATTACATGG 368
Query 7131 --TAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCA 7188
||| || || | || | || ||||| | ||||||| || | || | ||| |||
Sbjct 367 CTTAACTGGTCAACGCCTTTGCCAGTATAATCATCATGACAAGTTTTGTATTCAGCCCCA 308
Query 7189 AAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTC 7235
||||| | ||||||||| ||||| | || || || || ||||||||
Sbjct 307 AAATGACGCCATTGAAAGCCATATACTGGTCCCAAGTCTCCTTCTTC 261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594151114215600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |