Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq38155 131 2e-25 seq188621 102 1e-16 >seq38155 Length=21922 Score = 131 bits (144), Expect = 2e-25 Identities = 223/322 (69%), Gaps = 6/322 (2%) Strand=Plus/Plus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 ||||||| |||| || ||||| ||||| | ||||| || ||||| ||| || || | Sbjct 13333 TTCATGACACAGTTGTCAATCAATTGCTGGCCAAAATTGACGGTGTGGAACAGTTGAACA 13392 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 | ||| || | | || |||||||| || | |||| | |||||||| |||||| | |||| Sbjct 13393 ACATTCTAGTCATTGGAATGACCAATCGTCGTGATATGATTGATGAAGCTTTACTTCGAC 13452 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAA 164962 ||||||| || ||| | |||| ||||| | ||||| | | || || | |||| Sbjct 13453 CTGGTCGCTTGGAAGTACAAATGGAAATTAGTTTACCGAATGAGTCTGGTCGTGTACAAA 13512 Query 164963 TTTTAAAAGTTCATGTGGCTAAA---ATGAAATCCTGTGATATATTATCTCCCGATGTAG 165019 |||| || ||||| | ||| |||| | | | ||| | | |||||||||| Sbjct 13513 TTTTGAATATTCAT---ACAAAACGTATGAGAGAGTTTAATAAGATTGCCCCCGATGTAG 13569 Query 165020 ATTTAAATAAAATAGCTGCCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAG 165079 || || |||| ||| | ||||| |||| || ||||||||| | || || |||| Sbjct 13570 ATAATAAGGAAATTGCTTCTATGACTAAGAATTTCAGCGGTGCTGAACTTGAAGGTTTAG 13629 Query 165080 TAAGAGCCGCTCAATCAACCGC 165101 | || || || ||||| ||||| Sbjct 13630 TCAGGGCAGCCCAATCCACCGC 13651 Score = 118 bits (130), Expect = 1e-21 Identities = 215/312 (69%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| | |||| |||||||| | ||||| | || ||||| | ||||||| Sbjct 12872 ATTGGGACTTTGGTAAAATGGGAATTGGTGGTTTGGACAAGGAATTCAATGCTATTTTCC 12931 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 | || |||||||| ||| || | |||| ||| || | || |||| || || || | Sbjct 12932 GTCGTGCATTTGCATCTCGAGTATTTCCACCAGAATTAGTTGAACAATTGGGTTGCAAGC 12991 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 | | ||||||||||| ||| |||| || || || |||||||| ||||||||| || Sbjct 12992 ACGTTAAAGGAATTTTGTTATATGGTCCACCAGGAACTGGTAAAACTTTAATGGCTAGAC 13051 Query 164573 GCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629 |||| || | ||||| ||| || || || ||||| |||||||| || | Sbjct 13052 AAATTG-GAAATATGTTAAATGCTCGTGAACC--CAAGATTGTCAATGGTCCACAAATCC 13108 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 || ||||||| || ||||| || ||||| ||| | ||| | | || || ||||| | Sbjct 13109 TGGACAAATACGTTGGTGAATCTGAAGCCAATATCCGAAGGCTTTTCGCTGAAGCTGAGG 13168 Query 164690 AAGAACAAAAGA 164701 ||||| |||||| Sbjct 13169 AAGAAGAAAAGA 13180 >seq188621 Length=750 Score = 102 bits (112), Expect = 1e-16 Identities = 273/407 (67%), Gaps = 24/407 (6%) Strand=Plus/Minus Query 6841 TAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAG-CTTG 6899 |||| |||| |||||| | |||| | ||| ||||| | | | | | ||| | || Sbjct 655 TAAACGTGAGTATCTCCAATGTTATGGACAAAATCACCAACTCTTAAGTTA-CAGACATG 597 Query 6900 AGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCAT 6959 |||||| | || ||||| || |||| || | ||| || || || || || ||||| Sbjct 596 AGCAATCATATGAGTTAACAAAACATAGCTGGCAATATTGAATGGAACTCCCAAACCCAT 537 Query 6960 ATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTGTCTAT----AGCATAAAATT 7015 ||| | | |||||| || | |||||| | || || || | ||||||| | Sbjct 536 ATCACCAGCTCTTTGGTACAAAGAACAAGAAAG----TTCTCCATTTTGAACATAAAACT 481 Query 7016 GACACAATAC-ATGACATGGAGGTAAAACAGCC---TGATCTATATCAGATGGATTCCAA 7071 | |||| || ||||||||| || || ||| | | || || ||||||||| Sbjct 480 GT-ACAAAACTATGACATGGTGG---AAGGGCCATTTTAGGGATGTCCACAGGATTCCAA 425 Query 7072 GCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTG- 7130 || ||||| |||| | ||| ||||||||| ||| |||||||| ||| |||| || Sbjct 424 GCTGTCATGCAAATCCTTCTGTCATTTGGA-TTGGTTTTAATTGTGT--GGATTACATGG 368 Query 7131 --TAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCA 7188 ||| || || | || | || ||||| | ||||||| || | || | ||| ||| Sbjct 367 CTTAACTGGTCAACGCCTTTGCCAGTATAATCATCATGACAAGTTTTGTATTCAGCCCCA 308 Query 7189 AAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTC 7235 ||||| | ||||||||| ||||| | || || || || |||||||| Sbjct 307 AAATGACGCCATTGAAAGCCATATACTGGTCCCAAGTCTCCTTCTTC 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594151114215600