Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq9075 122 5e-23
seq20522 116 2e-21
seq43899 91.5 8e-14
seq62368 87.8 9e-13
>seq9075
Length=8733
Score = 122 bits (134), Expect = 5e-23
Identities = 82/91 (90%), Gaps = 1/91 (1%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
||||||||| || | |||||||||| |||||||||| ||||||||||||||||||||
Sbjct 8070 AATAAAAAAGAAATTGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 8011
Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
||||||||| |||||||||||||||||||||
Sbjct 8010 CGACGCTCTAACCAACTGAGCTAATGGGCCG 7980
Score = 95.1 bits (104), Expect = 6e-15
Identities = 59/64 (92%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 5218 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 5277
Query 11516 TGAG 11519
||||
Sbjct 5278 TGAG 5281
>seq20522
Length=11045
Score = 116 bits (128), Expect = 2e-21
Identities = 80/91 (88%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 11439 TTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498
|||| ||||| | ||||||||||| |||||||||| |||||||||||||||||||
Sbjct 1085 TTAACGAAAAAAGTAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGC 1144
Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||||| ||||||||||||||||||||
Sbjct 1145 ACGACGCTCTAACCAACTGAGCTAATGGGCC 1175
>seq43899
Length=4029
Score = 91.5 bits (100), Expect = 8e-14
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
|| |||||| | ||| |||||||||| |||||||||| ||||||||||||||||||||
Sbjct 73 TACTAAAAAGT-AAAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 15
Query 11500 CGACGCTCTRACCA 11513
||||||||| ||||
Sbjct 14 CGACGCTCTAACCA 1
>seq62368
Length=306
Score = 87.8 bits (96), Expect = 9e-13
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 52
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 260754889892116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |