Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 123 2e-23
seq229830 120 3e-22
seq80618 91.5 1e-13
seq160753 87.8 2e-12
>seq54449
Length=2482
Score = 123 bits (136), Expect = 2e-23
Identities = 548/849 (65%), Gaps = 23/849 (3%)
Strand=Plus/Plus
Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173
|| |||||||| || | || || |||||||| || | ||||||||||| || |||||
Sbjct 275 ACAGTGAATTGTATAGCATTGGCAGCGGGTTTTGTACGTAAATAGTACATTCCTGTTTTC 334
Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTATAGGTTGGATTGGCC 147233
| |||| || ||||| ||| || || || | ||| | |||| |||| | ||
Sbjct 335 AGACCCAATTTCCAAGCGTAGAAATGCATTGAAGTTAATTTTCCATAGTTTGGTTCTGCT 394
Query 147234 ACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATGTCC 147293
||| || ||||| || || || ||||| || ||| || | || || ||||| |
Sbjct 395 ACATGAATATTGAATGACTGACTTTGATCAATAAAAGCACCTCTATCAGCAGCCATTTG- 453
Query 147294 AACACTACTTTTTGTTTA-ATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTG-TG 147351
|| || ||| | | ||||||||| | || || | || | |||||| ||| ||
Sbjct 454 AATTGTAGATTTAATGGATATTTCCCAAACAGTTTTATAAAGTTCTCTGATAT-GTGCTG 512
Query 147352 GAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATTT---TTATCATGATAT 147408
||||| || || | ||||| ||| || ||| |||||||| || |||| ||
Sbjct 513 GAATTCTTTCGATTTCTTGTATAGAACCACGTTTTGAAATAATTTCGTTTTTCATATCAT 572
Query 147409 CTGTCGAATATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTTGAT 147468
| ||| ||| | | | | | ||| | || | ||| || || || |||||
Sbjct 573 C-GTCCCATAAATCAAGCTCTGTTA-AGTCCTT-GAGCAAATGGTGGTTTACAACTTGGA 629
Query 147469 ACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTCGT 147528
|||| || || | |||| || || | ||| |||| | || ||||| || || |
Sbjct 630 ACTCACCAGATAATACTCGACGGTTATAAATATTTGAAGTATATGGTTCGAATGATTCAT 689
Query 147529 TGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATTGC 147588
|||| || | ||| || ||||| | || || ||||| ||||||||||||||||| |
Sbjct 690 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTTGGCATTGGTGCAATCAATAATGAATTTC 749
Query 147589 GTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTCGATT 147648
|| || || | |||| ||| || | | ||| | ||| | |||| | |
Sbjct 750 TTACTCCATGAACCTTTATTTTATCCTTTAGAGCTTGCCAATCCCACAAATCA---GTTG 806
Query 147649 GGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCGTAAG 147708
|| | | | ||||| |||| | ||||| | ||| || | |||||||| || || |
Sbjct 807 GGGTTTTGTCCCACATATCATATTGTAAGATTCCTTTGCTAACTGGGCTTCCCTCATATG 866
Query 147709 AATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AGTGCACCATAATA 147766
|| || || || | || ||| ||||| |||| ||| || || ||||||||
Sbjct 867 TTTCATAAGTACCCTCTTTTTCAGCAAGTTCACAACTT--GCTTCAAGAGCTCCATAATA 924
Query 147767 AATAGTTTCTGAAATCTTT-TTATTTAAATCTCT-AGCCTCTTGGCTGTCGTAGGGCATA 147824
||| | ||| |||| ||| | |||| || ||||| || || ||||| || |||
Sbjct 925 AAT--TGTCTCAAATATTTGCTGATTAAGCAACTGAGCCTTTTCACTTTCGTAAGG-ATA 981
Query 147825 TC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTCT 147883
| || || || | ||| | | ||||| | |||||| ||||| || | ||| |
Sbjct 982 ACGCATAAGAATCAAAGCATCAGAGAAACCTTGTACACCGATCCCGATAGGCCTGTGACG 1041
Query 147884 GAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATTGAG 147943
||||| || | ||| || ||| |||||| |||| | || || ||||| || |
Sbjct 1042 TAAATTTGACTTTCTAGCTTCAGGCAATGGATAATAATTAACATCTATTATTTTGTTTAA 1101
Query 147944 ATTATTGGT 147952
||| ||||
Sbjct 1102 ATTTCTGGT 1110
>seq229830
Length=7395
Score = 120 bits (132), Expect = 3e-22
Identities = 126/166 (76%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 26831 CACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACA 26890
|||||| || | |||||| ||||| ||||| ||||| || ||||| ||||||||
Sbjct 1 CACCATTGAAAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCAACA 60
Query 26891 AAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACAT 26950
| ||||||| | ||| || || |||||||||| | | | ||||||||||||||
Sbjct 61 GCGTCTCATTTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTTAGCGACTATAACAT 120
Query 26951 TCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996
|||||||||||||||| |||| ||||| || | ||| | ||||||
Sbjct 121 TCAAAAAGAATCTACTCTCCACTTGGTCTTGCGTCTTCGCGGAGGA 166
Score = 113 bits (124), Expect = 4e-20
Identities = 162/227 (71%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || |||||||| | || ||| | ||| | || ||
Sbjct 6015 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACTATTACCTTAGAAGTTGAGCCATCT 6074
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | ||||| |||||| ||||||||||| || ||||| |||| |
Sbjct 6075 GACACAATTGAAAACGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATC-A 6133
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | ||||| | | ||| |||||| | ||||||| | | | | |||||||| ||
Sbjct 6134 CAACGTCTCATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACTTTAAGCGACTACAAT 6193
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||| ||||||||| | || |||| || | ||| |||||||
Sbjct 6194 ATCCAAAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTCGAGGAGG 6240
Score = 102 bits (112), Expect = 8e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| || ||||||||| | ||||| | ||| | || |
Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | || || ||||| ||||||||||| || ||||| ||||||
Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAACGTCAGCGACTATA 26946
||| | | || | | ||||||||| | ||||| | | | |||| |||||||
Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCA--GACTATA 5964
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||||||||||| ||||| | || | | || ||||||||
Sbjct 5965 ACATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGAGG 6013
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || || || || || ||||| ||| | || ||| | || | ||| |
Sbjct 5555 CAATATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACC 5614
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
| ||| || || || | || ||| || ||| ||||| ||||| || || || ||
Sbjct 5615 ATCCGATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGA 5674
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|| ||| | | || | || ||||||||| | ||||||| | | | ||||| ||
Sbjct 5675 CCAGCAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTA 5734
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||||||||| || | || |||| || | ||| | |||||
Sbjct 5735 CAACATTCAAAAAGAATCAACCCTTCACTTGGTATTGCGTCTTCGTGGAGG 5785
>seq80618
Length=357
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 26761 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820
||| || |||||| | || || || || || ||||| || | || ||| | ||| | |
Sbjct 116 CAACCAGAATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTTG 175
Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880
|| | ||||||||| || | ||||| ||||| ||||||||||| || || |
Sbjct 176 AACCTTCCGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCAC 235
Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940
| ||||||||| | | || | || ||| || ||| | ||||||| | | | | ||
Sbjct 236 CAGATCAACAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGTCCG 295
Query 26941 ACTATAACATTCAAAAAGAATCTAC 26965
|||| ||||| ||||| ||||||||
Sbjct 296 ACTACAACATCCAAAAGGAATCTAC 320
>seq160753
Length=592
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| || ||||||||| | |||||| | ||| | || ||
Sbjct 363 ATGCAGATTTTCGTCAAAACTTTGACTGGAAAAACTATCACCCTTGAAGTTGAGCCATCA 304
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | || || |||||| || || ||||| || ||||| ||||||
Sbjct 303 GACACCATTGAGAACGTTAAGGCTAAGATTCAAGATAAGGAAGGTATCCCTCCAGATCAA 244
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946
||| | | || | || ||| || || | ||||||| | | ||||| | ||||
Sbjct 243 CAACGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGCACATTGTCAG--ATTATA 186
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGT 26977
|||||||||| || || || | ||| ||||
Sbjct 185 ACATTCAAAAGGAGTCAACCCTTCATTTGGT 155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477280017005520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |