Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq54449 123 2e-23 seq229830 120 3e-22 seq80618 91.5 1e-13 seq160753 87.8 2e-12 >seq54449 Length=2482 Score = 123 bits (136), Expect = 2e-23 Identities = 548/849 (65%), Gaps = 23/849 (3%) Strand=Plus/Plus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || |||||||| || | || || |||||||| || | ||||||||||| || ||||| Sbjct 275 ACAGTGAATTGTATAGCATTGGCAGCGGGTTTTGTACGTAAATAGTACATTCCTGTTTTC 334 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTTATAGGTTGGATTGGCC 147233 | |||| || ||||| ||| || || || | ||| | |||| |||| | || Sbjct 335 AGACCCAATTTCCAAGCGTAGAAATGCATTGAAGTTAATTTTCCATAGTTTGGTTCTGCT 394 Query 147234 ACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATGTCC 147293 ||| || ||||| || || || ||||| || ||| || | || || ||||| | Sbjct 395 ACATGAATATTGAATGACTGACTTTGATCAATAAAAGCACCTCTATCAGCAGCCATTTG- 453 Query 147294 AACACTACTTTTTGTTTA-ATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTG-TG 147351 || || ||| | | ||||||||| | || || | || | |||||| ||| || Sbjct 454 AATTGTAGATTTAATGGATATTTCCCAAACAGTTTTATAAAGTTCTCTGATAT-GTGCTG 512 Query 147352 GAATTTCATCAATATTTTGTACAGATCCGTTGTTTTTAATAATTT---TTATCATGATAT 147408 ||||| || || | ||||| ||| || ||| |||||||| || |||| || Sbjct 513 GAATTCTTTCGATTTCTTGTATAGAACCACGTTTTGAAATAATTTCGTTTTTCATATCAT 572 Query 147409 CTGTCGAATATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTTGAT 147468 | ||| ||| | | | | | ||| | || | ||| || || || ||||| Sbjct 573 C-GTCCCATAAATCAAGCTCTGTTA-AGTCCTT-GAGCAAATGGTGGTTTACAACTTGGA 629 Query 147469 ACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTCGT 147528 |||| || || | |||| || || | ||| |||| | || ||||| || || | Sbjct 630 ACTCACCAGATAATACTCGACGGTTATAAATATTTGAAGTATATGGTTCGAATGATTCAT 689 Query 147529 TGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATTGC 147588 |||| || | ||| || ||||| | || || ||||| ||||||||||||||||| | Sbjct 690 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTTGGCATTGGTGCAATCAATAATGAATTTC 749 Query 147589 GTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTCGATT 147648 || || || | |||| ||| || | | ||| | ||| | |||| | | Sbjct 750 TTACTCCATGAACCTTTATTTTATCCTTTAGAGCTTGCCAATCCCACAAATCA---GTTG 806 Query 147649 GGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCGTAAG 147708 || | | | ||||| |||| | ||||| | ||| || | |||||||| || || | Sbjct 807 GGGTTTTGTCCCACATATCATATTGTAAGATTCCTTTGCTAACTGGGCTTCCCTCATATG 866 Query 147709 AATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AGTGCACCATAATA 147766 || || || || | || ||| ||||| |||| ||| || || |||||||| Sbjct 867 TTTCATAAGTACCCTCTTTTTCAGCAAGTTCACAACTT--GCTTCAAGAGCTCCATAATA 924 Query 147767 AATAGTTTCTGAAATCTTT-TTATTTAAATCTCT-AGCCTCTTGGCTGTCGTAGGGCATA 147824 ||| | ||| |||| ||| | |||| || ||||| || || ||||| || ||| Sbjct 925 AAT--TGTCTCAAATATTTGCTGATTAAGCAACTGAGCCTTTTCACTTTCGTAAGG-ATA 981 Query 147825 TC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTCT 147883 | || || || | ||| | | ||||| | |||||| ||||| || | ||| | Sbjct 982 ACGCATAAGAATCAAAGCATCAGAGAAACCTTGTACACCGATCCCGATAGGCCTGTGACG 1041 Query 147884 GAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATTGAG 147943 ||||| || | ||| || ||| |||||| |||| | || || ||||| || | Sbjct 1042 TAAATTTGACTTTCTAGCTTCAGGCAATGGATAATAATTAACATCTATTATTTTGTTTAA 1101 Query 147944 ATTATTGGT 147952 ||| |||| Sbjct 1102 ATTTCTGGT 1110 >seq229830 Length=7395 Score = 120 bits (132), Expect = 3e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 26831 CACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACA 26890 |||||| || | |||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct 1 CACCATTGAAAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCAACA 60 Query 26891 AAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACAT 26950 | ||||||| | ||| || || |||||||||| | | | |||||||||||||| Sbjct 61 GCGTCTCATTTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTTAGCGACTATAACAT 120 Query 26951 TCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 |||||||||||||||| |||| ||||| || | ||| | |||||| Sbjct 121 TCAAAAAGAATCTACTCTCCACTTGGTCTTGCGTCTTCGCGGAGGA 166 Score = 113 bits (124), Expect = 4e-20 Identities = 162/227 (71%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || |||||||| | || ||| | ||| | || || Sbjct 6015 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACTATTACCTTAGAAGTTGAGCCATCT 6074 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | ||||| |||||| ||||||||||| || ||||| |||| | Sbjct 6075 GACACAATTGAAAACGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATC-A 6133 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||| | | ||| |||||| | ||||||| | | | | |||||||| || Sbjct 6134 CAACGTCTCATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACTTTAAGCGACTACAAT 6193 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| ||||||||| | || |||| || | ||| ||||||| Sbjct 6194 ATCCAAAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTCGAGGAGG 6240 Score = 102 bits (112), Expect = 8e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| || ||||||||| | ||||| | ||| | || | Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || ||||| ||||||||||| || ||||| |||||| Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAACGTCAGCGACTATA 26946 ||| | | || | | ||||||||| | ||||| | | | |||| ||||||| Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCA--GACTATA 5964 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||||||| ||||| | || | | || |||||||| Sbjct 5965 ACATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGAGG 6013 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || || ||||| ||| | || ||| | || | ||| | Sbjct 5555 CAATATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACC 5614 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | ||| || || || | || ||| || ||| ||||| ||||| || || || || Sbjct 5615 ATCCGATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGA 5674 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || ||| | | || | || ||||||||| | ||||||| | | | ||||| || Sbjct 5675 CCAGCAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTA 5734 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||||| || | || |||| || | ||| | ||||| Sbjct 5735 CAACATTCAAAAAGAATCAACCCTTCACTTGGTATTGCGTCTTCGTGGAGG 5785 >seq80618 Length=357 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 26761 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 ||| || |||||| | || || || || || ||||| || | || ||| | ||| | | Sbjct 116 CAACCAGAATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTTG 175 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 || | ||||||||| || | ||||| ||||| ||||||||||| || || | Sbjct 176 AACCTTCCGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCAC 235 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 | ||||||||| | | || | || ||| || ||| | ||||||| | | | | || Sbjct 236 CAGATCAACAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGTCCG 295 Query 26941 ACTATAACATTCAAAAAGAATCTAC 26965 |||| ||||| ||||| |||||||| Sbjct 296 ACTACAACATCCAAAAGGAATCTAC 320 >seq160753 Length=592 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| || ||||||||| | |||||| | ||| | || || Sbjct 363 ATGCAGATTTTCGTCAAAACTTTGACTGGAAAAACTATCACCCTTGAAGTTGAGCCATCA 304 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | || || |||||| || || ||||| || ||||| |||||| Sbjct 303 GACACCATTGAGAACGTTAAGGCTAAGATTCAAGATAAGGAAGGTATCCCTCCAGATCAA 244 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 ||| | | || | || ||| || || | ||||||| | | ||||| | |||| Sbjct 243 CAACGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGCACATTGTCAG--ATTATA 186 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGT 26977 |||||||||| || || || | ||| |||| Sbjct 185 ACATTCAAAAGGAGTCAACCCTTCATTTGGT 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477280017005520