Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq229830 114 1e-20 seq160753 109 5e-19 seq80618 104 2e-17 seq54449 87.8 2e-12 >seq229830 Length=7395 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| || ||||||||| | || || | ||||| ||| | Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || ||||| ||||||||||| || ||||| |||||| Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGA-AACGTCAGCGATTATA 24168 || | |||| | | ||||| ||| | ||||| ||| | | |||| || |||| Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCA--GACTATA 5964 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||||||||||||||| | |||||||| ||| | | |||||||| Sbjct 5965 ACATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGAGG 6013 Score = 109 bits (120), Expect = 5e-19 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 24053 CACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACA 24112 |||||| || | |||||| ||||| ||||| |||||||| ||||| |||||||| Sbjct 1 CACCATTGAAAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCAACA 60 Query 24113 GAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACAT 24172 | | || |||| | ||| ||||| |||||||||| | | | | ||||| |||||||| Sbjct 61 GCGTCTCATTTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTTAGCGACTATAACAT 120 Query 24173 TCAAAAAGAATCTAC 24187 ||||||||||||||| Sbjct 121 TCAAAAAGAATCTAC 135 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || |||||||| | |||||| | ||||| ||| ||| | Sbjct 6015 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACTATTACCTTAGAAGTTGAG-CCATC 6073 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | ||||| |||||| ||||||||||| || ||||| |||| Sbjct 6074 TGACACAATTGAAAACGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATC- 6132 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | ||| || ||| | ||||||| | | | ||||| || || Sbjct 6133 ACAACGTCTCATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACTTTAAGCGACTACAA 6192 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| |||||||| |||| || || Sbjct 6193 TATCCAAAAGGAATCTACTCTTCACTTGGT 6222 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || || || || ||||| ||| | |||||| | || || || | Sbjct 5555 CAATATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACC 5614 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||| || || || | || ||| || ||| ||||| ||||| || || || || Sbjct 5615 ATCCGATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGA 5674 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || || | |||| | || ||||| ||| | ||||||| | | | |||||||| Sbjct 5675 CCAGCAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTA 5734 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||||||||||||||| || |||| || || || Sbjct 5735 CAACATTCAAAAAGAATCAACCCTTCACTTGGTATT 5770 >seq160753 Length=592 Score = 109 bits (120), Expect = 5e-19 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| || ||||||||| | || ||| | ||||| ||| ||| | Sbjct 363 ATGCAGATTTTCGTCAAAACTTTGACTGGAAAAACTATCACCCTTGAAGTTGAG-CCATC 305 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | || || |||||| || || ||||| || ||||| ||||| Sbjct 304 AGACACCATTGAGAACGTTAAGGCTAAGATTCAAGATAAGGAAGGTATCCCTCCAGATCA 245 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAAC-GTCAGCGATTAT 24167 ||| | |||| | || ||| ||||| | ||||||| || | | ||||| ||||| Sbjct 244 ACAACGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGCACATTGTCAG--ATTAT 187 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||||||||| || || || ||||||| || || Sbjct 186 AACATTCAAAAGGAGTCAACCCTTCATTTGGTATT 152 >seq80618 Length=357 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 23983 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042 ||| || |||||| | || || || || || ||||| || | |||||| | ||||| | Sbjct 116 CAACCAGAATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTTG 175 Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 | | ||||||||| || | ||||| ||||| ||||||||||| || || | Sbjct 176 AACCTTCCGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCAC 235 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG 24162 | |||||||| | |||| | || ||| |||||| | ||||||| | | | | || Sbjct 236 CAGATCAACAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGTCCG 295 Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 | || ||||| ||||| |||||||| |||| || ||||| Sbjct 296 ACTACAACATCCAAAAGGAATCTACCCTTCACTTGGTGTT 335 >seq54449 Length=2482 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 132199 ATGTTGATTTACTATTTGATATTCACCCGATAAGACTCTTCGTACGTACAAATTACTAGT 132258 ||| || ||||| | ||| | ||||| ||||| |||| || || | ||| ||| Sbjct 610 ATGGTGGTTTACAACTTGGAACTCACCAGATAATACTCGACGGTTATAAATATTTGAAGT 669 Query 132259 AAACGGCTCGAACGATTCGTTGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATGTA 132318 | | || ||||| ||||| ||||||||||| |||||||| || | || || ||||| Sbjct 670 ATATGGTTCGAATGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTTGGCATTGG 729 Query 132319 GGCAATCAATAATGAATT 132336 ||||||||||||||||| Sbjct 730 TGCAATCAATAATGAATT 747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428725380971355