Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq44627 143 2e-29
seq173138 136 3e-27
seq103615 136 3e-27
seq58847 136 3e-27
seq80618 134 9e-27
seq160753 129 4e-25
seq35335 118 7e-22
seq229830 116 2e-21
seq212097 113 3e-20
seq220204 107 1e-18
>seq44627
Length=16465
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
||||| || | || || ||||| ||||| | ||| ||||| ||||| ||||||||
Sbjct 8118 ATGGGTTCCGTCAATGTTAATCGCAATGTCACAGACATTTTCTATCGCTATAAAATGCCC 8059
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
| || ||||| || ||||| || ||||| || ||||||||||| ||||| || |||
Sbjct 8058 AGAATTACAGCCAAAGTTGAGGGCAAAGGAAATGGAATTAAAACCGTTATTGTTAATATG 7999
Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGC 6341
| ||||| || ||||| | ||||| || || || || | || |||||||| || |||
Sbjct 7998 GCAGAAGTAGCAAAGGCTATTGGACGGCCCGCTACTTATACAACCAAATATTTTGGATGC 7939
Query 6342 GAACTTGGCGCTCAGACGCAGTTTGATCACAA 6373
|||||||| ||||| || || |||||| ||||
Sbjct 7938 GAACTTGGAGCTCAAACACAATTTGATTACAA 7907
>seq173138
Length=647
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 319 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 378
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 379 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 413
>seq103615
Length=417
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 264 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 323
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 324 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 358
>seq58847
Length=278
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 149 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 90
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 89 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 55
>seq80618
Length=357
Score = 134 bits (148), Expect = 9e-27
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | |||||||||||| ||||| || |||||||| || ||||| || |
Sbjct 352 TACCACCACGGAGACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGG 293
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| | || || ||||| |||||||| || || | ||||||||||| | |
Sbjct 292 ACAAGGTGCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTG 233
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||||||||| || || ||| ||||| | | || || | |||||
Sbjct 232 GGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAA 173
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || ||||| || ||||| ||||| || || ||||| ||||||||
Sbjct 172 CTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 124
>seq160753
Length=592
Score = 129 bits (142), Expect = 4e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | |||||| ||||||||||| || |||||||||||| || ||||| |
Sbjct 135 TACCACCACGGAGACGCAATACCAAATGAAGGGTTGACTCCTTTTGAATGTTATAATCTG 194
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| | || || || || |||||||| || || | ||||||||||| | |
Sbjct 195 ACAATGTGCGTCCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGAG 254
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| || || ||| || ||| || |||| | || ||| ||||
Sbjct 255 GGATACCTTCCTTATCTTGAATCTTAGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAA 314
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| | || |||||||| || ||||| ||||| ||||| ||||||||
Sbjct 315 CTTCAAGGGTGATAGTTTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 363
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | ||||| |||||||| ||||||||| || || ||||| |
Sbjct 363 TACCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTG 422
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || ||| | || || |||||||| || || || || | ||||| ||||| | |
Sbjct 423 ATAATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAG 482
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| |||||||| ||| || || ||| || || | | || || |||||
Sbjct 483 GGATTCCTTCTTTATCCTGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAA 542
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| | || |||||||| || ||||||||||| ||||| ||||||||
Sbjct 543 CTTCAAGGGTGATAGTTTTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591
Score = 82.4 bits (90), Expect = 5e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 38193 CGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACA 38252
||||||||||| | |||| ||||| || ||| ||| || ||| || |||| ||
Sbjct 11 CGTTGTTGATCTGGAGGGATACCTTCCTTATCCTGAATCTTAGCCTTAACGTTCTCGATG 70
Query 38253 GTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATC 38312
|| ||| |||||||||||| || || || ||||| ||||||||||| ||||| ||
Sbjct 71 GTGTCTGATGGTTCAACTTCTAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAGATT 130
Query 38313 TGCAT 38317
|||||
Sbjct 131 TGCAT 135
>seq35335
Length=15304
Score = 118 bits (130), Expect = 7e-22
Identities = 83/95 (87%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||| ||||| ||||||| | |||||| |
Sbjct 7512 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAAATAGTTGATAGGGACAGTAGGAATCTCAT 7571
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||| ||||||||||||||||
Sbjct 7572 TAATCCATTCATGCGCGTTACTAATTAGATGACGA 7606
>seq229830
Length=7395
Score = 116 bits (128), Expect = 2e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| ||||| | ||| || || ||||| || || || |||||||| || || || |
Sbjct 6015 TACCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTG 5956
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| |||| || |||||||| || ||||| || | ||||||||||| | |
Sbjct 5955 ACAATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAG 5896
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||||||||| || || ||| || || | | || || | ||||
Sbjct 5895 GAATACCTTCTTTGTCTTGGATCTTGGCCTTAACGTTTTCAATTGTGTCAGAAGGCTCAA 5836
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| ||||| || ||||| || ||||||||||| ||||| || |||||
Sbjct 5835 CTTCCAATGTGATGGTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCAT 5787
Score = 104 bits (114), Expect = 2e-17
Identities = 161/229 (70%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| |||| | ||| | ||||| |||||||| |||||||| |||||||| ||
Sbjct 6242 TACCTCCTCGAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCGC 6183
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| || | || || |||||||| |||||||| || || |||||| |||| | |
Sbjct 6182 TTAAAGTGCGACCATCTTCCAATTGTTTACCGGCAAAGATGAGACGTTGT-GATCTGGAG 6124
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||||||||| ||| || ||| || || | | || || ||||
Sbjct 6123 GAATACCTTCTTTGTCTTGAATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCAA 6064
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| |||||||| || || ||||| || || ||||| || |||||
Sbjct 6063 CTTCTAAGGTAATAGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 6015
>seq212097
Length=1187
Score = 113 bits (124), Expect = 3e-20
Identities = 81/92 (88%), Gaps = 6/92 (7%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1084 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGT 1025
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGA 25988
| |||| ||||| ||||| |||||||||||||
Sbjct 1024 T-ATCCATTCATACGCGTAACTAATTAGATGA 994
>seq220204
Length=2162
Score = 107 bits (118), Expect = 1e-18
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1245 CTCTCTATTCAGAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCAT 1304
Query 20007 GGTAATATTTAGCCTTA 20023
||| |||||||| ||||
Sbjct 1305 GGTTATATTTAGTCTTA 1321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334004051592071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |