Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_008252.1 Length=84264 Score E Sequences producing significant alignments: (Bits) Value seq48002 89.7 3e-13 >seq48002 Length=15713 Score = 89.7 bits (98), Expect = 3e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 25707 GGTAAAGACGCGTGTCAAGGTGATTCGGGTGGACCAATGGTTGTTAACGATAGATTGGCT 25766 || || ||| | || || || ||||| ||||||||| |||||||| | |||| |||| | Sbjct 11402 GGAAAGGACACATGCCAGGGAGATTCTGGTGGACCATTGGTTGTTGATGATATTTTGGTT 11461 Query 25767 GGAATCGTGTCGTGGGGAAATGGGTGTGGTAGAAATGGTTGGCCAGGTGTTTACACC 25823 ||| |||| || ||||||| ||||||| || | ||| | || |||||||||||| Sbjct 11462 GGAGTCGTTTCTTGGGGAATCGGGTGTGCTAAACCTGGATACCCTGGTGTTTACACC 11518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 268761082299225