Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 399 3e-106
seq11307 95.1 2e-14
seq55846 86.0 8e-12
>seq54449
Length=2482
Score = 399 bits (442), Expect = 3e-106
Identities = 672/954 (70%), Gaps = 25/954 (3%)
Strand=Plus/Plus
Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812
|| || | |||||||||||| | |||| | | | | ||| | || || ||||||||
Sbjct 1291 GAAGCTAAATTACAAACGGCGATTTCATCTGGAGCAGAATACTCTACGATTTCAGTGCAG 1350
Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872
|||||||||||||| || || || | ||||||||||||||||||| |||| || |||||
Sbjct 1351 AGATTACTACACTTAATTGTACCAACATTTTGTTGATTACTCTTTCTGTTGCAAGCATCT 1410
Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932
|| || | || ||||||| |||||||| | || || || ||||| || | |||||
Sbjct 1411 TTGTACAACATATATGGAGTTCCAGTTTCTACTTGTGACTCAATAATTGCATACCAGAGT 1470
Query 62933 ACTCGAGCCTTTATTATAGA-TTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCG 62991
| |||| |||||| | |||| | || || | |||| || |||| | |
Sbjct 1471 TGTTGAGCTTTTATTTTCCTGTTTGCTTTTCCTTCAT-TTTCATACTTAATATAGAGTTT 1529
Query 62992 TTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGA 63051
|| || || || |||||||||| || || ||| ||||||| | |||||||| | ||
Sbjct 1530 CTCAAATTCTTCACCCCAAACATCGTGCAATCCGGGACATTTGTGAGGACACATAAGAGA 1589
Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAA 63110
||| ||| ||||| ||| || ||||||||||| | ||| |||||||| | ||| || ||
Sbjct 1590 CCAATCTTCGTCAGCCTCAACACGTTTCATAAACAAATCTGGAATCCATAAAGCGTAGAA 1649
Query 63111 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63170
| |||||||| | || | || || |||||||| || || || | ||| | || | |
Sbjct 1650 A-AGATCTCTAGCTCGGTTCTCTTCTTTTCCTGTGTTTTTCTTCAAATCCAAAAATTCAA 1708
Query 63171 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63230
|||||| |||||||| |||||||| || || || | ||||||||| ||||| ||||
Sbjct 1709 AAATATCTGAATGCCAAGGTTCCAAATAAATTGCGAATGCTCCAGGCCTCTTGTTGCCTC 1768
Query 63231 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 63290
| ||||||| |||| || ||||| | ||||| ||||| |||| | |||||| |
Sbjct 1769 CTTGATCTACATATCGGGCAACATTATTGAAGACTCTTAACATGGGAACTAAACCATTTG 1828
Query 63291 ATGTACCATTGGTCCCTGAGATATAGCTTCCACTG--GCACGAATAT----TACTAATTG 63344
| || ||||| || || || |||||| | || || |||||| ||| |||
Sbjct 1829 AAGTTCCATTAGTTCC--AGCAATAGCTGTCCCTTTAGCCCGAATACAGTGTAC--ATT- 1883
Query 63345 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA-TCATAG 63403
|| || ||||| ||||| || || || | || ||| ||| |||| | | ||
Sbjct 1884 -TAATCCGATTCCGCCTGCAGACTTGGAAATCATAGCACATTGTTC-AACGGACTTGAAG 1941
Query 63404 ATGCCCTCTATACTATC--ATC-CATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63460
|| || ||||| ||| | | ||| ||||| | |||||||| ||||| ||| |
Sbjct 1942 ATCCCTTCTATGGAATCTGAGCACAT--TGTTA-GAAGAAAACATGAAGACAATTGAGGC 1998
Query 63461 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGT 63520
| || | ||| |||||| || ||||| |||||| |||| | ||||||| |
Sbjct 1999 CTTGGTGTGGCAGCAGCAAATAACGTTGGAGAGGCGTGAATAAAATACCTTTCAGATAAA 2058
Query 63521 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 63580
||||| || ||||||||||||| ||||| || | |||||||||||| ||||| | |
Sbjct 2059 AGATTATATGTCTCAATAGCTGCATCTATGTCGTTTCCATGAATTCCTACAGCGACTCTC 2118
Query 63581 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTT 63640
|| | |||||| |||||||||||| | || || ||||| ||||| | || ||
Sbjct 2119 ATAAGCATGTGTTGAGGTCTTTCAGCAATTTTTCCATTTATCTTCAAAAGATATGAGCGC 2178
Query 63641 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 63694
||||| |||||||| ||||| || |||||| ||| ||| || ||||| |||
Sbjct 2179 TCCAATGTTTTAAATCCAAAGTAATTGTATCCAAA-ACTCTATCATAAATGATA 2231
Score = 334 bits (370), Expect = 1e-86
Identities = 655/961 (68%), Gaps = 24/961 (2%)
Strand=Plus/Plus
Query 61835 TTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTAC 61894
|||| ||||| | |||||||| || | | || |||||||| ||||||| |||||||
Sbjct 263 TTATTTTTGTCAACAGTGAATTGTATAGCATTGGCAGCGGGTTTTGTACGTAAATAGTAC 322
Query 61895 ATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAA 61954
||||| ||||| ||||| | |||| |||| |||||||| |||| ||| |||
Sbjct 323 ATTCCTGTTTTCAGACCCAATTTCCAAGCGTAGAAATGCATTGAAGTTAATTTTCCATAG 382
Query 61955 CTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCT 62014
| || ||||||| ||| ||||| | || ||||||||||| || || || || || ||
Sbjct 383 TTTGGTTCTGCTACATGAATATTGAATGACTGACTTTGATCAATAAAAGCACCTCTATCA 442
Query 62015 GCAGCCATTTTTATAATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATAAACTCGCTT 62073
|||||||||| || | | ||| |||| |||||||||| ||||||||||| | |
Sbjct 443 GCAGCCATTTGAATTGTAG-ATTTAATGGATATTTCCCAAACAGTTTTATAAAGTTCTCT 501
Query 62074 AATATCTTCTGGAA-GGTTTGTATT--CTGAATGGATCCACCATCTGCCATAATCCTATT 62130
|||| | |||||| ||| ||| || || || |||| | || ||||| ||
Sbjct 502 GATATGTGCTGGAATTCTTTCGATTTCTTGTATAGAACCACGTTTTGAAATAATTTCGTT 561
Query 62131 CTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAAC 62190
|| || ||||| | |||||| | ||| ||||| | | || | ||| | || ||
Sbjct 562 TTTCATATCATCGTCCCATAAATCAAGCTCTGTTAAGTCCTTGAGCAAATGGTGGTTTAC 621
Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250
||||| || || ||||| ||||||| || | |||||||| ||||| ||||| |
Sbjct 622 AACTTGGAACTCACCAGATAATACTCGACGGTTATAAATATTTGAAGTATATGGTTCGAA 681
Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310
|| ||||| ||||||||||||||||||||||| ||||| ||||| ||||| | ||||||
Sbjct 682 TGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTTGGCATTGGTGCAATCAATAA 741
Query 62311 ACTATTTCTAAGACCGTATGTTC--TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 62368
|||||| | || ||| | | |||||||| ||||||| || ||||| ||| | |
Sbjct 742 TGAATTTCTTACTCC--ATGAACCTTTATTTTATCCTTTAGAGCTTGCCAATCCCACAAA 799
Query 62369 TCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT----ACTGGCGTACGA 62424
|| | || ||||| || || || ||||| |
Sbjct 800 TCAGTTGGGGTTTTGTCCCACATATCATATTGTAAGATTCCTTTGCTAACTGGGCT---- 855
Query 62425 TCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGC 62484
||| ||||||| || || | || || || ||||| ||||||||||| || || | ||
Sbjct 856 TCCCTCATATGTTTCATAAGTACCCTCTTTTTCAGCAAGTTCACAACTTGCTTCAAGAGC 915
Query 62485 ACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG-ATCT-TGCGCTTCCAGGCTATCA 62542
|| |||||||| || || || || | || ||| || | || || || || || ||
Sbjct 916 TCCATAATAAATTGTCTCAAATATTTGCTGATTAAGCAACTGAGCCTTTTCA--CTTTCG 973
Query 62543 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 62602
| |||||| | ||||| || || || | || ||||| ||||| || ||||||||
Sbjct 974 TAAGGATAACGCATAAGAATCAAAGCATCAGAGAAACCTTGTACACCGATCCCGATAGGC 1033
Query 62603 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62662
|| || | ||| || || |||||| || | ||||||||||||| |||||| |||
Sbjct 1034 CTGTGACGTAAATTTGACTTTCTAGCTTCAGGCAATGGATAATAATTAACATCTATTATT 1093
Query 62663 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT--- 62719
|| || | ||||||| || | ||| || || |||| ||| | |||||| ||
Sbjct 1094 TTGTTTAAATTTCTGGTTATAATTTTTGTAACTTCTTTCAATTTTGGGAAATCATATTTA 1153
Query 62720 CGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCA 62779
|| || | ||| | || || | ||| | || || | |||||||||||| | |||
Sbjct 1154 CGATCAGCAGTTATATACTGATTAAGTGCTATGGAAGCTAAATTACAAACGGCGATTTCA 1213
Query 62780 T 62780
|
Sbjct 1214 T 1214
>seq11307
Length=4647
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 63814 AAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGC 63873
|||| ||| || ||||||||||||| || || || || |||||||| |||| || ||
Sbjct 3747 AAATGCTTTCTTAGTTTCTTTGTGTAAGTTGGAAACAGCAATTCTAGCAGCTAAGATAGC 3806
Query 63874 ATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTC 63933
|||||| | ||||| ||| || |||| ||||| |||| || || ||| | |||| |||
Sbjct 3807 ATAATCTGCATGTTTTGTGGTCAAAGTTGCTGCCGTTTCAGCGGCGAGATTATCCAGTTC 3866
Query 63934 TACCGTTGTTACACC 63948
| || ||||||||
Sbjct 3867 TTGAGTCGTTACACC 3881
>seq55846
Length=11783
Score = 86.0 bits (94), Expect = 8e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 27515 CCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATA 27574
|||| ||| || || || |||| || |||||||||||||| || ||||| | ||||
Sbjct 10812 CCTAGTTCTTTAACTTGTGTTAGAGACCTCCAATCCATATTCGCACTTCCAATGTAAAAG 10871
Query 27575 TGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCCT 27619
||| |||||||| |||||||| || || ||||||||||| |||
Sbjct 10872 TGTTGATTATCAGCTATCCAAATCTTAGTGTGAAGAACTCCGCCT 10916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631802062863600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |