Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq209397 127 2e-24
seq129372 125 8e-24
seq47606 118 1e-21
>seq209397
Length=1090
Score = 127 bits (140), Expect = 2e-24
Identities = 91/104 (88%), Gaps = 2/104 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 219 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 160
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366
|||||||||||||||||||||||||| | || | |||||||
Sbjct 159 GTGGGTTCGAACCCCACACCTGACAATCTTTTTTCATAATTTTT 116
>seq129372
Length=484
Score = 125 bits (138), Expect = 8e-24
Identities = 80/86 (93%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 146 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 205
Query 126323 GTGGGTTCGAACCCCACACCTGACAA 126348
||||||||||||||||||||||||||
Sbjct 206 GTGGGTTCGAACCCCACACCTGACAA 231
>seq47606
Length=10757
Score = 118 bits (130), Expect = 1e-21
Identities = 78/85 (92%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCC-CTCGGGAGCG 126323
|||||||||||||||| |||||||||||||||||||||| |||||| || |||||||
Sbjct 6280 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTCCCGAGAGGGAGCG 6339
Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||
Sbjct 6340 TGGGTTCGAACCCCACACCTGACAA 6364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 555252579048840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |