Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 141 8e-29
seq229830 138 9e-28
seq160753 136 3e-27
seq80618 132 4e-26
>seq54449
Length=2482
Score = 141 bits (156), Expect = 8e-29
Identities = 306/458 (67%), Gaps = 0/458 (0%)
Strand=Plus/Plus
Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838
||||| || || |||| ||||| | || || || || || || ||||||||||| |||
Sbjct 269 TTGTCAACAGTGAATTGTATAGCATTGGCAGCGGGTTTTGTACGTAAATAGTACATTCCT 328
Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898
||||||| ||| |||||||| || | || || | || || | | ||| | |||
Sbjct 329 GTTTTCAGACCCAATTTCCAAGCGTAGAAATGCATTGAAGTTAATTTTCCATAGTTTGGT 388
Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958
| | | |||||| ||||| ||||||||||||||||| | || | ||| ||||||
Sbjct 389 TCTGCTACATGAATATTGAATGACTGACTTTGATCAATAAAAGCACCTCTATCAGCAGCC 448
Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018
|| ||| | ||| | |||||||| || ||||| ||||| ||||| | |||
Sbjct 449 ATTTGAATTGTAGATTTAATGGATATTTCCCAAACAGTTTTATAAAGTTCTCTGATATGT 508
Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078
||| ||| ||| || | || | || |||| |||||||| |||| |||
Sbjct 509 GCTGGAATTCTTTCGATTTCTTGTATAGAACCACGTTTTGAAATAATTTCGTTTTTCATA 568
Query 129079 TGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTGA 129138
| |||| | |||| || | | || || | | ||| | | ||||| |||||
Sbjct 569 TCATCGTCCCATAAATCAAGCTCTGTTAAGTCCTTGAGCAAATGGTGGTTTACAACTTGG 628
Query 129139 AAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTCA 129198
|| ||||| | || || || || ||||| || || | || || || ||||||
Sbjct 629 AACTCACCAGATAATACTCGACGGTTATAAATATTTGAAGTATATGGTTCGAATGATTCA 688
Query 129199 TTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCAT 129236
||||| || || |||||||| |||| || || |||||
Sbjct 689 TTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTTGGCAT 726
Score = 114 bits (126), Expect = 1e-20
Identities = 351/533 (66%), Gaps = 21/533 (4%)
Strand=Plus/Plus
Query 129697 ATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCG 129756
|| || || ||||| || ||||| |||| | | || ||||| || ||||| | |
Sbjct 1288 ATGGAAGCTAAATTACAAACGGCGATTTCATCTGGAGCAGAATACTCTACGATTTCAGTG 1347
Query 129757 CACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGTTGCAAGCA 129816
|| | ||||||| ||||| || || | || | ||||||||| || |||||||||||
Sbjct 1348 CAGAGATTACTACACTTAATTGTACCAACATTTTGTTGATTACTCTTTCTGTTGCAAGCA 1407
Query 129817 TCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAAC 129876
|||||||||| ||| || || || || ||||| ||||| | || | ||| | | | |
Sbjct 1408 TCTTTGTACAACATATATGGAGTTCCAGTTTCTACTTGTGACTCAATAAT--TGCATACC 1465
Query 129877 A-AG-TCTCGAGCCTTGAT----CTGTCTTACAAATTTGCCACATTTCTCGTATGCCACA 129930
| || | | |||| || || |||| || | ||| | ||||| || || | |
Sbjct 1466 AGAGTTGTTGAGCTTTTATTTTCCTGT-TTGC--TTTTCCTTCATTT-TCATACTTAATA 1521
Query 129931 TACAGTTGTTCAAATTCTGAGCCGTGTACGGTGTCGAGCAA---CGGCGATTCACGCGGA 129987
|| |||| ||||||||| || || ||| |||| || ||| | |||
Sbjct 1522 TAGAGTTTCTCAAATTCTTCACCCCAAAC---ATCGTGCAATCCGGGACATTTGTGAGGA 1578
Query 129988 CACATCAAACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCAC 130047
||||| | | ||| | | || || || || ||||||||||||||||| || | |||
Sbjct 1579 CACATAAGAGACCAATCTTCGTCAGCCTCAACACGTTTCATAAACAAATCTGGAATCCAT 1638
Query 130048 AGGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCA 130107
| ||||| || | ||||| ||| | || || || |||| |||| ||
Sbjct 1639 AAAGCGTAGAAAAGATCTCTAGCTCGGTTCTCTTCTTTTCCTGTGTTTTTCTTCAAATCC 1698
Query 130108 AGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC---CTTC 130164
| || || |||| || | ||||| ||||| | ||||||||| | ||| || | ||
Sbjct 1699 AAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAATAAATTGCGAATGCTCCAGGCCTC 1758
Query 130165 CGTTTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACAT 130217
||||| ||||| || || | || | |||| ||| |||||| |||||
Sbjct 1759 TTGTTGCCTCCTTGATCTACATATCGGGCAACATTATTGAAGACTCTTAACAT 1811
>seq229830
Length=7395
Score = 138 bits (152), Expect = 9e-28
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| ||||| || || ||||| || |||||||| | || | || || ||| |
Sbjct 5556 AATATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACCA 5615
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
||||||| | || || | ||| |||||||| |||||||| || || || || ||
Sbjct 5616 TCCGATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGAC 5675
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| |||||| | || || || |||||||| || || ||| ||||| | |||||||
Sbjct 5676 CAGCAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTAC 5735
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||||||||| ||| | || || || ||||| | || ||||||
Sbjct 5736 AACATTCAAAAAGAATCAACCCTTCACTTGGTATTGCGTCTTCGTGGAGGT 5786
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || ||||| || || || ||||| |||| | ||||| || | |
Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || || || |||||||| || |||||||| || ||||||
Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| |||||||| || || || ||||| | || || || |||
Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCAGACTATAAC 5966
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||||||||| || | |||||||| || || | | ||||||
Sbjct 5967 ATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGAGGT 6014
Score = 105 bits (116), Expect = 6e-18
Identities = 114/151 (75%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354
||||| || || || |||||||| || ||||| || |||||||| ||||| || ||||
Sbjct 15 TCAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCAACAGCGTCTCATTTTTG 74
Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414
|||| || ||| | || ||| |||||| | ||| || ||||||||||||||||| |
Sbjct 75 CCGGAAAGCAGCTCGAAGATGGCCGCACTCTTAGCGACTATAACATTCAAAAAGAATCTA 134
Query 22415 CCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
| | || || || ||||| | ||||||||
Sbjct 135 CTCTCCACTTGGTCTTGCGTCTTCGCGGAGG 165
Score = 102 bits (112), Expect = 7e-17
Identities = 160/228 (70%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||||| || || || || | || | ||||| || | |
Sbjct 6015 ATGCAAATCTTCGTCAAGACTTTGACTGGAAAGACTATTACCTTAGAAGTTGAGCCATCT 6074
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | |||| || ||||||||||| || |||||||| || |||| |
Sbjct 6075 GACACAATTGAAAACGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATC-A 6133
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || |||||||| ||||| || || ||| ||||| | ||| |||||
Sbjct 6134 CAACGTCTCATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACTTTAAGCGACTACAAT 6193
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| || | || || ||| | || | || ||||||
Sbjct 6194 ATCCAAAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTCGAGGAGGT 6241
>seq160753
Length=592
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || |||||||| || || ||||| |||| |||||||| || | |
Sbjct 363 ATGCAGATTTTCGTCAAAACTTTGACTGGAAAAACTATCACCCTTGAAGTTGAGCCATCA 304
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | || || |||||||| ||||| ||||| || || ||||||
Sbjct 303 GACACCATTGAGAACGTTAAGGCTAAGATTCAAGATAAGGAAGGTATCCCTCCAGATCAA 244
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| || ||||| || ||| ||||| | || ||||| |||
Sbjct 243 CAACGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGCACATTGTCAGATTATAAC 184
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || || ||| | ||||| || ||||| | || || |||
Sbjct 183 ATTCAAAAGGAGTCAACCCTTCATTTGGTATTGCGTCTCCGTGGTGGT 136
>seq80618
Length=357
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || ||||| || ||||| || | || | ||||| ||| | ||
Sbjct 124 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTTGAACCTTCC 183
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || |||||||| || || || ||||| ||||||
Sbjct 184 GACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAA 243
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || ||||| || || || || ||| |||||| | ||||| ||||||
Sbjct 244 CAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGTCCGACTACAAC 303
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||| ||||| ||| | || || || ||||| | || || |||
Sbjct 304 ATCCAAAAGGAATCTACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGT 351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418546124782165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |