Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq160753 197 3e-45 seq80618 183 6e-41 seq229830 158 2e-33 seq193759 100 5e-16 >seq160753 Length=592 Score = 197 bits (218), Expect = 3e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||||||||| || || || ||||| ||||| ||||||||||| || Sbjct 137 CCACCACGGAGACGCAATACCAAATGAAGGGTTGACTCCTTTTGAATGTTATAATCTGAC 196 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| |||||||| |||||||| || | | |||||| || || || Sbjct 197 AATGTGCGTCCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGGG 256 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| ||||||||||| ||||| ||| ||| |||||||||| || || ||| Sbjct 257 ATACCTTCCTTATCTTGAATCTTAGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACT 316 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| |||||||| || | || |||||||| |||||||| Sbjct 317 TCAAGGGTGATAGTTTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 363 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||||| ||||||||||||||||| || Sbjct 365 CCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGAT 424 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||||| || || || || ||||| || | | ||| || || || || Sbjct 425 AATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGG 484 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || || || ||||| ||||||||| || || ||||| | || ||| ||| Sbjct 485 ATTCCTTCTTTATCCTGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACT 544 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| ||||| || || | ||| |||||||| |||||||| Sbjct 545 TCAAGGGTGATAGTTTTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591 Score = 114 bits (126), Expect = 2e-20 Identities = 99/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGT 68398 |||||| || || || || |||||||| || |||||||| ||||| ||| ||||||||| Sbjct 13 TTGTTGATCTGGAGGGATACCTTCCTTATCCTGAATCTTAGCCTTAACGTTCTCGATGGT 72 Query 68399 GTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTG 68458 ||||| || ||| ||||| || |||||||| || || || | ||| |||||||| || || Sbjct 73 GTCTGATGGTTCAACTTCTAAAGTGATGGTCTTACCAGTCAAGGTTTTGACGAAGATTTG 132 Query 68459 CAT 68461 ||| Sbjct 133 CAT 135 >seq80618 Length=357 Score = 183 bits (202), Expect = 6e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || ||||| |||||||| || || || || ||||||||||| || ||||| Sbjct 350 CCACCACGGAGACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGAC 291 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| || ||||| |||||||| || | | |||||| || ||||| Sbjct 290 AAGGTGCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 231 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| ||||| |||||||| || |||||||| | | ||| ||| Sbjct 230 ATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACT 171 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 |||||||| ||||| || || || | ||||||||||| ||||||||| || Sbjct 170 TCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATTCTG 120 >seq229830 Length=7395 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| |||||||||||||| || || || |||||||| ||||| |||||| Sbjct 5785 CCTCCACGAAGACGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTC 5726 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| || || || || ||||| || | | ||| ||||| || || Sbjct 5725 AAAGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGG 5666 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| ||||| || || || || || || || || | || ||| || Sbjct 5665 ATTCCTTCCTTGTCCTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACC 5606 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || ||||| || || | ||||||||||| |||||||| Sbjct 5605 TCCAAGGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 5559 Score = 154 bits (170), Expect = 3e-32 Identities = 171/227 (75%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | |||||||| || || || || |||||||| || || ||| Sbjct 6240 CCTCCTCGAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTT 6181 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| || || || ||||| || ||||| | |||| | || || ||| Sbjct 6180 AAAGTGCGACCATCTTCCAATTGTTTACCGGCAAAGATGAGACGTTGT-GATCTGGAGGA 6122 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||||||||| ||||||||| || || ||||| | || || ||| Sbjct 6121 ATACCTTCTTTGTCTTGAATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCAACT 6062 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| || || ||||| || | ||||||||||| || ||||| Sbjct 6061 TCTAAGGTAATAGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 6015 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || ||||| || || || || || |||||||| |||||||| || || Sbjct 6013 CCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGAC 5954 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | || ||||| || || || || || || || | | |||||| || || ||| Sbjct 5953 AATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 5894 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| ||||| ||||| ||| || || ||||| | | || ||| Sbjct 5893 ATACCTTCTTTGTCTTGGATCTTGGCCTTAACGTTTTCAATTGTGTCAGAAGGCTCAACT 5834 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||||||||| || | ||| |||||||| || ||||| Sbjct 5833 TCCAATGTGATGGTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCAT 5787 Score = 147 bits (162), Expect = 4e-30 Identities = 132/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 |||||||||||| ||||| |||||||| || || || |||||||| |||||||| ||| Sbjct 166 TCCTCCGCGAAGACGCAAGACCAAGTGGAGAGTAGATTCTTTTTGAATGTTATAGTCGCT 107 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | |||||||| | |||||| ||||| || ||||| | ||||| || || || Sbjct 106 AAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAAATGAGACGCTGTTGATCTGGAGG 47 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 ||||||||||||||| || ||||| || |||||| || |||||| Sbjct 46 AATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTTTCAATGGTG 1 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || ||||| ||||||||||||||||| || | ||| | |||||||| Sbjct 7385 ACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGACAATGTGCGTCCATCTTCC 7326 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCC 68359 || || || || ||||| || | | |||||| || || ||||| || Sbjct 7325 AATTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACC 7279 >seq193759 Length=801 Score = 100 bits (110), Expect = 5e-16 Identities = 138/192 (72%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 |||||||| || |||| ||| || || | |||| || || ||||| || || || || Sbjct 363 TTTTGGATATTGTAATTGGAAAGAGTACGGCCATATTTAAATTGCTTGCCAGCAAAGATC 304 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 ||||||||| || || ||||| || || |||||||||||||| || | || |||| Sbjct 303 CATCTTTGTTGATCTGGAGGAATTCCCTCTTTGTCTTGAATCTTGGCTATAACATTCTCG 244 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 || || | | | |||| |||| ||||| |||||||| | | ||||| || || || Sbjct 243 ATAGTAACCGAAGGTTCT-CTTCGAAGGTAATGGTTTTACAGATAAGGGTTTTTACAAAA 185 Query 68454 ATCTGCATTATG 68465 || || ||| || Sbjct 184 ATTTGAATTCTG 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918960742988520