Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq189423 100 7e-18 >seq189423 Length=758 Score = 100 bits (110), Expect = 7e-18 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| || || ||||| | | |||| |||||| || || ||||| ||||||| Sbjct 217 ACCCAATGGCTCGTGTATTTCCTAAAGTCACAAAATGTACATTCCATAAATATGGTCCTT 158 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 | || ||| || | |||| ||| |||||||| | || || |||| | |||||||||| Sbjct 157 CAGGTTCCGTGCAGAACTTCGATGGACTCTGTGTGCTACCATTGAACATTGTCAACGAGA 98 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCCAT 3494 | |||||| | || | |||||||||||| | | ||||||| Sbjct 97 AAATCTACGTCTTTTTGTGGTTCTGGTTCATCATCTTAGCCAT 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12448462903500