Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq229830 116 4e-21
seq54449 116 4e-21
seq80618 98.7 1e-15
seq160753 93.3 4e-14
>seq229830
Length=7395
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294
|||| ||| | || ||||||||||||||||| || |||| | ||||| |||||||
Sbjct 5995 ACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGACAATGTGCGTCCGTCTTCC 5936
Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354
| || ||||| ||| | || | || || || || |||||||| |||||||| |||||
Sbjct 5935 AATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGG 5876
Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414
|| || ||| || || | ||| ||| | || ||||| | || | ||| ||
Sbjct 5875 ATCTTGGCCTTAACGTTTTCAATTGTGTCAGAAGGCTCAACTTCCAATGTGATGGTTTTT 5816
Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| ||||| ||||||||||||||
Sbjct 5815 CCAGTCAAGGTTTTGACGAAAATTTGCAT 5787
Score = 95.1 bits (104), Expect = 1e-14
Identities = 91/114 (80%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACG-GTGCGCGCGTCTTCAAGCTGCTTGCC 64305
|| ||||||||||||||||| || || || | | ||||| | ||||| |||||||| ||
Sbjct 135 GTAGATTCTTTTTGAATGTTATAGTC-GCTAAGAGTGCGGCCATCTTCGAGCTGCTTTCC 77
Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
|||| ||||||| ||||| || || |||||||| ||||| || || || || ||
Sbjct 76 GGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTT 23
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||||||||||||||||||||| | ||||| | ||||| | ||
Sbjct 5761 TGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAAAGTGCGTCCATCTTCCAATTGT 5702
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||| || | || | || |||||||| || || |||||||| || || || | ||||
Sbjct 5701 TTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTG-AATTTT 5643
Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||||| ||| || | ||||| | || || || | || | || || || ||
Sbjct 5642 AGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAAGGTAATTGTTTTACCAGT 5583
Query 64420 CAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || |||||||| ||||| ||
Sbjct 5582 CAAAGTCTTGACGAAAATCTGCATATT 5556
>seq54449
Length=2482
Score = 116 bits (128), Expect = 4e-21
Identities = 347/529 (66%), Gaps = 21/529 (4%)
Strand=Plus/Plus
Query 154587 GACGCCAAGTTGCAAACGGCAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCAC 154646
|| || || || |||||||| ||||| || | | | || | || ||||| | |||
Sbjct 1291 GAAGCTAAATTACAAACGGCGATTTCATCTGGAGCAGAATACTCTACGATTTCAGTGCAG 1350
Query 154647 AAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCT 154706
| |||||| || ||| || || | |||| ||||| || ||||||| || |||
Sbjct 1351 AGATTACTACACTTAATTGTACCAACATTTTGTTGATTACTCTTTCTGTTGCAAGCATCT 1410
Query 154707 TTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACAGA 154766
|||||||| || || || || || ||||| ||||| | |||||||||| | | ||||
Sbjct 1411 TTGTACAACATATATGGAGTTCCAGTTTCTACTTGTGACTCAATAATTG--CATACCAGA 1468
Query 154767 CTTC--GCGCCTCAACTTGACAAGTAAATCGATTTTCGCTC----TCATATTGTTCGTAC 154820
|| | || | | || | || | | ||||| || ||||| | ||
Sbjct 1469 GTTGTTGAGCTTTTATTTTCCT-GT---TTGCTTTTCCTTCATTTTCATACTTAATATAG 1524
Query 154821 AGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATC 154880
||||| ||||| ||| || | || || ||| |||||||| || ||||||||
Sbjct 1525 AGTTTCTCAAATTCTTCACCCCAAACATCGTGCAATCCGGGACATTTGTGAGGACACATA 1584
Query 154881 AATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCG 154940
| ||||| ||||| | || ||||||||||||||||| || | ||| ||||||
Sbjct 1585 AGAGACCAATCTTCGTCAGCCTCAACACGTTTCATAAACAAATCTGGAATCCATAAAGCG 1644
Query 154941 TACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAA 155000
|| || | ||| | || || ||||| || ||||| ||| |||| ||||||
Sbjct 1645 TAGAAAAGATCTCTAGCTCGGTTCTCTTCTTTTCCTGTGTTTTTCTTCAAATCCAAAAAT 1704
Query 155001 TCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGC-----GCCT-TTGCGT 155054
||| | || || | ||||| || || ||||| | || | || |||| |||
Sbjct 1705 TCAAAAATATCTGAATGCCAAGGTTCCAAATAAATTGCGAATGCTCCAGGCCTCTTG--- 1761
Query 155055 TTTCCTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACA 155103
|| ||||||||||| || | || || ||||||| | || | ||||
Sbjct 1762 TTGCCTCCTTGATCTACATATCGGGCAACATTATTGAAGACTCTTAACA 1810
>seq80618
Length=357
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| ||||| |||||||| || | | |||||| | ||||| | |||
Sbjct 326 TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCATCTTCCAATTGC 267
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| ||||| | || | || || || || || || ||||||||||| ||||| || ||
Sbjct 266 TTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTTG 207
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | || || | || ||||| | || | |||||| || |||
Sbjct 206 GCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTAATGGTCTTACCAGTC 147
Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444
||||| || |||||||| ||||||
Sbjct 146 AAAGTCTTGACGAAAATCTGCATT 123
>seq160753
Length=592
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 64240 ATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTG 64299
||||| || || || ||||||||||| ||||||| | ||||| | ||||| | |||
Sbjct 160 ATGAAGGGTTGACTCCTTTTGAATGTTATAATCTGACAATGTGCGTCCATCTTCCAACTG 219
Query 64300 CTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359
||| ||||| | || | || || || || ||||| || ||||| || ||||| || ||
Sbjct 220 CTTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCTTGAATCTT 279
Query 64360 TTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||| || ||| | || || | || ||||| | || | || || || ||
Sbjct 280 AGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACTTCAAGGGTGATAGTTTTTCCAGT 339
Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443
||||||||| |||||||| |||||
Sbjct 340 CAAAGTTTTGACGAAAATCTGCAT 363
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || ||||| ||||| ||||||| | ||||| | ||||| | ||
Sbjct 389 TGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGTGCGTCCATCTTCCAATTGT 448
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||| || | || | || ||||| || ||||| ||||||||||| || || || ||
Sbjct 449 TTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATCTTA 508
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| || || | ||| ||| | || ||||| | || | || ||||| |||
Sbjct 509 GCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGATAGTTTTGCCAGTC 568
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| ||||| || |||||
Sbjct 569 AAGGTTTTGACGAAGATCTGCAT 591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498201819572040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |