Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq229830 172 4e-38 seq80618 123 2e-23 seq193759 87.8 1e-12 seq160753 86.0 4e-12 >seq229830 Length=7395 Score = 172 bits (190), Expect = 4e-38 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || || |||||||| || |||||||| |||||||||||||| | | | | | ||| Sbjct 5770 AATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAAAGTGCGTCCATCT 5711 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || ||||||||||||||| | |||||||| || ||||| || |||||||||||||| Sbjct 5710 TCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTCC 5651 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 |||||| ||| ||| |||| ||||||||| ||| || || |||||||| ||| Sbjct 5650 TGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAAGGTAATTGTT 5591 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182 ||||| |||| ||| || || ||||| |||||||| || Sbjct 5590 TTACCAGTCAAAGTCTTGACGAAAATCTGCATATTGGA 5553 Score = 123 bits (136), Expect = 2e-23 Identities = 158/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CG 15021 ||| |||||||| || ||||| |||||||| ||||| || || ||| ||| || || Sbjct 5999 TAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTC--TGACAATGTGCGTCCG 5942 Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| |||||||||||||| | |||||||| ||||| || ||||| ||||| ||| Sbjct 5941 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCTTTG 5882 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || || ||| || || |||| || || || | || || || || || ||| Sbjct 5881 TCTTGGATCTTGGCCTTAACGTTTTCAATTGTGTCAGAAGGCTCAACTTCCAATGTGATG 5822 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || |||| ||||| || |||||||||||| Sbjct 5821 GTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCATA 5786 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| ||||| || ||||| || ||||| ||||| | | | | | ||||| Sbjct 6223 AACCAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTTAAAGTGCGACCATCTTC 6164 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||||||| || || | || | ||| ||| | || ||||| ||||| ||||| Sbjct 6163 CAATTGTTTACCGGCAAAGATGAGACGTTGT-GATCTGGAGGAATACCTTCTTTGTCTTG 6105 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| || || || |||| || || || || || ||||||||||| || || Sbjct 6104 AATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCAACTTCTAAGGTAATAGTCTT 6045 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| ||| || || || ||||||||| Sbjct 6044 TCCAGTCAAAGTCTTGACGAAGATTTGCATA 6014 >seq80618 Length=357 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022 || || || ||||||||||| || ||||| |||||||| ||| || || || | | Sbjct 335 AACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCG--GACAAGGTGCGTCCAT 278 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| ||||| || || ||| | |||||||| ||||| || ||| |||||||| |||| Sbjct 277 CTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTGT 218 Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142 | || ||| || ||| |||| || || ||| | ||| || || |||||||||| Sbjct 217 CTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTAATGG 158 Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | ||||| |||| ||| || || ||||| ||||| Sbjct 157 TCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 124 >seq193759 Length=801 Score = 87.8 bits (96), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 14989 TTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATC 15048 ||||| || ||||||| | ||| | | | | || ||||| |||||||| | ||| Sbjct 363 TTTTGGATATTGTAATTGGAAAGAGTACGGCCATATTTAAATTGCTTGCCAGCAAAGATC 304 Query 15049 AAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCT 15108 | | ||||| || |||||||| || ||||| ||| ||| | | ||| | || Sbjct 303 CATCTTTGTTGATCTGGAGGAATTCCCTCTTTGTCTTGAATCTTGGCTATAACATTCTCG 244 Query 15109 ATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168 |||||| | | |||| | || |||||||||||||||| | || |||||||||||| Sbjct 243 ATAGTAACCGAAGGTTCT-CTTCGAAGGTAATGGTTTTACAGATAAGGGTTTTTACAAAA 185 Query 15169 ATTTGCATATTTGAAATAAATTTTTTAATACTTATAAGA 15207 ||||| || | || | || |||| ||||||| |||| Sbjct 184 ATTTGAAT-TCTGTA--AACTTTTGAAATACTTTGAAGA 149 >seq160753 Length=592 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022 || || ||||||||||| || || ||||| ||||| |||| |||| ||| || | | Sbjct 152 AATACCAAATGAAGGGTTGACTCCTTTTGAATGTTATAAT--CTGACAATGTGCGTCCAT 209 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| || || || || ||| | |||||||| ||||| || || || |||||||| | Sbjct 210 CTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTAT 269 Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142 | ||| || || || | || || || || || || || | ||| || | Sbjct 270 CTTGAATCTTAGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACTTCAAGGGTGATAG 329 Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| || |||| |||||| || ||||| |||||| Sbjct 330 TTTTTCCAGTCAAAGTTTTGACGAAAATCTGCATA 364 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCT 15024 ||| || ||||| || || || ||||| ||||| ||||| ||| ||| || | ||| Sbjct 382 AACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATC--TGATAATGTGCGTCCATCT 439 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || ||||||||||||||| | |||||||| || || || || |||||||| || || Sbjct 440 TCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTTATCC 499 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 || || || || |||| || || || ||| || || | ||| || ||| Sbjct 500 TGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGATAGTT 559 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || |||| ||||| || || || |||||| Sbjct 560 TTGCCAGTCAAGGTTTTGACGAAGATCTGCATA 592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356385651250685