Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 199 4e-46
seq160753 120 3e-22
seq80618 118 1e-21
seq229830 113 4e-20
>seq54449
Length=2482
Score = 199 bits (220), Expect = 4e-46
Identities = 557/855 (65%), Gaps = 0/855 (0%)
Strand=Plus/Minus
Query 123816 ACAAAAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAG 123875
||||||| | || | ||||| |||||||| || |||||||||| |||||| |||
Sbjct 1122 ACAAAAATTATAACCAGAAATTTAAACAAAATAATAGATGTTAATTATTATCCATTGCCT 1063
Query 123876 GAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCC 123935
||||| | ||| ||||| ||||| || |||| | || | ||||| || |
Sbjct 1062 GAAGCTAGAAAGTCAAATTTACGTCACAGGCCTATCGGGATCGGTGTACAAGGTTTCTCT 1003
Query 123936 GACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACG 123995
|| || || | | |||| || |||||||| || | || ||||||||||| |
Sbjct 1002 GATGCTTTGATTCTTATGCGTTATCCTTACGAAAGTGAAAAGGCTCAGTTGCTTAATCAG 943
Query 123996 CAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATT 124055
|||||| || ||||||||||| || ||| | || || || || |||||||| |||
Sbjct 942 CAAATATTTGAGACAATTTATTATGGAGCTCTTGAAGCAAGTTGTGAACTTGCTGAAAAA 883
Query 124056 CACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGAC 124115
| || | || |||| || | ||| ||||| | ||| ||| || || || || ||
Sbjct 882 GAGGGTACTTATGAAACATATGAGGGAAGCCCAGTTAGCAAAGGAATCTTACAATATGAT 823
Query 124116 ATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCG 124175
|||||| | || || || |||||||||| ||| | | |||| | ||| |
Sbjct 822 ATGTGGGACAAAACCCCAACTGATTTGTGGGATTGGCAAGCTCTAAAGGATAAAATAAAG 763
Query 124176 ACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAA 124235
|| || | | || || | ||| | || ||||| || || | |||||||||
Sbjct 762 GTTCATGGAGTAAGAAATTCATTATTGATTGCACCAATGCCAACTGCTTCAACTGCTCAA 703
Query 124236 ATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTG 124295
||||| |||||||| ||||| ||||| || | ||| ||| | || || |||||
Sbjct 702 ATTTTGGGAAACAATGAATCATTCGAACCATATACTTCAAATATTTATAACCGTCGAGTA 643
Query 124296 TTAGCCGGCGATTTTCAAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAAT 124355
||| | || || || ||||| |||| || |||||| | | ||||| | | | ||
Sbjct 642 TTATCTGGTGAGTTCCAAGTTGTAAACCACCATTTGCTCAAGGACTTAACAGAGCTTGAT 583
Query 124356 TTGTACGATGAAAACATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATC 124415
|| | || || | ||| |||||||||||| | |||| | || |||
Sbjct 582 TTATGGGACGATGATATGAAAAACGAAATTATTTCAAAACGTGGTTCTATACAAGAAATC 523
Query 124416 GCTTCGATTCCGGAACACGTCAAGCAACTGTACAAAACCGTGTGGGAAATGAAAAATAAA 124475
| ||||| | ||| ||| |||| || ||||| || |||||||| | ||||
Sbjct 522 GAAAGAATTCCAGCACATATCAGAGAACTTTATAAAACTGTTTGGGAAATATCCATTAAA 463
Query 124476 CGATTAATTGAAATGGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAAC 124535
|||| ||||||| | || |||| || | | ||||||||||| || || ||
Sbjct 462 TCTACAATTCAAATGGCTGCTGATAGAGGTGCTTTTATTGATCAAAGTCAGTCATTCAAT 403
Query 124536 GTGTTTGTAGCGGAACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGC 124595
| |||||| ||||| | ||| | | || || || | |||| ||||
Sbjct 402 ATTCATGTAGCAGAACCAAACTATGGAAAATTAACTTCAATGCATTTCTACGCTTGGAAA 343
Query 124596 AGCGGACTCAAAACGGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAA 124655
|| || ||||| || ||||| || ||| | || ||||| || ||| |||| || |||
Sbjct 342 TTGGGTCTGAAAACAGGAATGTACTATTTACGTACAAAACCCGCTGCCAATGCTATACAA 283
Query 124656 TTTACCGTCGACAAA 124670
|| || || ||||||
Sbjct 282 TTCACTGTTGACAAA 268
Score = 102 bits (112), Expect = 7e-17
Identities = 302/462 (65%), Gaps = 14/462 (3%)
Strand=Plus/Minus
Query 123303 GCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAAC 123362
|| || ||| | ||||| ||||| ||| | | || ||||| |||| || |||
Sbjct 1742 GCAATTTATTTGGAACCTTGGCATTCAGATATTTTTGAATTTTTGGATTTGAAGAAAAAC 1683
Query 123363 ATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTG 123422
| || ||||| || ||| | ||| | || |||||||||||| | || ||||||
Sbjct 1682 ACAGGAAAAGAAGAGAACCGAGCTAGAGATCTTTTCTACGCTTTATGGATTCCAGATTTG 1623
Query 123423 TTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCC 123482
|||||| ||| || | | |||| | ||||| || |||||||| | ||||||
Sbjct 1622 TTTATGAAACGTGTTGAGGCTGACGAAGATTGGTCTCTTATGTGTCCTCACAAATGTCCC 1563
Query 123483 GGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAA 123542
|| ||| ||| |||| || | | ||||| | | || | || || |||
Sbjct 1562 GGATTGCACGATGTTTGGGGTGAAGAATTTGAGAAACTCTATATTAAGTATGAAAATGAA 1503
Query 123543 GG-----CAAACAGGTTAGTCAG-GTTCCGGCACG-TGATTTGTTCAAATTTATTATCGA 123595
|| |||||||| | | | | || || || | || ||| |||| ||
Sbjct 1502 GGAAAAGCAAACAGGAAAATAAAAGCTCAACAACTCTGGTATG--CAA-----TTATTGA 1450
Query 123596 AACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAAC 123655
||||||| ||||| ||||| || || ||| | |||||||| || |||||||| || |
Sbjct 1449 GTCACAAGTAGAAACTGGAACTCCATATATGTTGTACAAAGATGCTTGCAACAGAAAGAG 1390
Query 123656 CAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATA 123715
||||| || | || ||||| || ||||||||||| ||| | ||||| | || ||
Sbjct 1389 TAATCAACAAAATGTTGGTACAATTAAGTGTAGTAATCTCTGCACTGAAATCGTAGAGTA 1330
Query 123716 CAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGAT 123757
| | | ||| || | ||||| |||||||| ||||| ||
Sbjct 1329 TTCTGCTCCAGATGAAATCGCCGTTTGTAATTTAGCTTCCAT 1288
>seq160753
Length=592
Score = 120 bits (132), Expect = 3e-22
Identities = 169/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | ||| || | ||| || ||||| |||||||| || ||||||||
Sbjct 134 ATACCACCACGGAGACGCAATACCAAATGAAGGGTTGACTCCTTTTGAATGTTATAATC- 192
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|||| | | | ||| ||||| || ||||| ||| | ||||| ||||| || || |
Sbjct 193 -TGACAATGTGCGTCCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTG 251
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| || || ||||| |||||||||| | || | | | || | || | |||||| || | |
Sbjct 252 GAGGGATACCTTCCTTATCTTGAA-TCTTAGCCTTAACGTTCTCAATGGTGTCTGATGGC 310
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| || || | ||||| || || | |||||| || ||||| |||||
Sbjct 311 TCAACTTCAAGGGTGATAGTTTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 363
Score = 104 bits (114), Expect = 2e-17
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195
|| || ||||| ||||||||||| |||||||| ||| | | | ||| |||||||
Sbjct 389 TGAAGAGTTGACTCCTTTTGGATGTTATAATC--TGATAATGTGCGTCCATCTTCCAATT 446
Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255
|||| || ||| | ||||| |||||||| || || || || ||||||||||| || || |
Sbjct 447 GTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTTATCCTGGATCT 506
Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
| |||| ||| | ||||| || | || ||||| || || | |||||||| |
Sbjct 507 TAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGATAGTTTTGCCAG 566
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
| | ||||| || || || |||||
Sbjct 567 TCAAGGTTTTGACGAAGATCTGCAT 591
>seq80618
Length=357
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | |||||| | || || || |||||||||||||| || || |||
Sbjct 353 ATACCACCACGGAGACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCG 294
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| |||||||| ||||| ||| | ||||| ||||| || || ||
Sbjct 293 GACAAGGTGCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGT 234
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || |||||||| ||||| || || |||| ||| | ||||||||||| ||
Sbjct 233 GGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCA 174
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | |||| || || || || | ||| || || ||||| |||||
Sbjct 173 ACTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 124
>seq229830
Length=7395
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || || | ||| || | || || |||||||| ||||| || || ||||||
Sbjct 5788 ATACCTCCACGAAGACGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCG 5729
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | || ||| ||||||||||| || ||| | ||||| ||||||||||| ||
Sbjct 5728 CTCAAAGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGG 5669
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| || || |||||||| ||| | ||| | || ||||| | ||
Sbjct 5668 GGGATTCCTTCCTTGTCCTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCA 5609
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | |||| ||||| || || | ||| || || ||||| |||||
Sbjct 5608 ACCTCCAAGGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 5559
Score = 102 bits (112), Expect = 7e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| | ||| | || |||| ||| || || ||||| ||||| || ||||| ||
Sbjct 6016 ATACCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTC- 5958
Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|||| | | | || ||||||||||| || || | ||||| ||||| || || |
Sbjct 5957 -TGACAATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTG 5899
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| ||||| |||||||| ||||| || || || | ||| | ||||| |||| ||
Sbjct 5898 GAGGAATACCTTCTTTGTCTTGGATCTTGGCCTTAACGTTTTCAATTGTGTCAGAAGGCT 5839
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| | || | ||||| || || | ||||| || |||||||||||
Sbjct 5838 CAACTTCCAATGTGATGGTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCAT 5787
Score = 102 bits (112), Expect = 7e-17
Identities = 145/203 (71%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || ||||||||||||||||| || ||||| | || | ||| |||||||||
Sbjct 6216 TGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTTAAAGTGCGACCATCTTCCAATTGT 6157
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | || | ||||| || || || ||||| |||||||| |||||||| ||
Sbjct 6156 TTACCGGCAAAGATGAGACGTTG-TGATCTGGAGGAATACCTTCTTTGTCTTGAATCTTA 6098
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|||| ||| | ||||| || | ||| ||||| | |||| || || || ||
Sbjct 6097 GCCTTGACGTTTTCAATTGTGTCAGATGGCTCAACTTCTAAGGTAATAGTCTTTCCAGTC 6038
Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340
| ||| || || || ||||||||
Sbjct 6037 AAAGTCTTGACGAAGATTTGCAT 6015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450697809108360
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