Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq5251 242 1e-58
seq229830 161 4e-34
seq160753 161 4e-34
seq230305 159 1e-33
seq80618 127 8e-24
seq48319 125 3e-23
seq56983 93.3 2e-13
>seq5251
Length=17865
Score = 242 bits (268), Expect = 1e-58
Identities = 478/699 (68%), Gaps = 15/699 (2%)
Strand=Plus/Minus
Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973
||||||||||| || | ||||| || | ||| ||||| || | | ||| ||||||||
Sbjct 15115 GCAATTGGAATCGACTTGGGAACAACATATTCCTGTGTTGGAATATTCCAGAATGGAAAA 15056
Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033
|| ||||| ||||| || || || ||| |||||||||| | || | |||||
Sbjct 15055 GTCGAAATAATAGCTAACGATCATGGAAATAGAACTACTCCAAGTTACGTTGGCTTTACT 14996
Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAAAT--CAATGGTAAATTCAAATGCCAAAA 451091
|| || ||| | || | || | ||||||| ||| || | || ||||||
Sbjct 14995 GACTCTGAACGCCTCATTGGAGACAATGCTAAAAGCCAA--GTTGCTATGAACCCCAAAA 14938
Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151
| || || | ||||| || ||||||||||| || | | |||||| || | |||
Sbjct 14937 ATACCGTTTTCGATGCAAAGCGTTTAATTGGACGAAAATTCGATGATCCTAAGATCCAAG 14878
Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211
| || | || || | | | | || || ||| || |||||| || | | || |
Sbjct 14877 AGGACATGAAGTTATGGCCATCAAA-GTTGTTAATGAAGGAGGAAAACCAAAAGTACAGG 14819
Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271
| | ||| || |||| ||||| ||| |||| || |||||| || |||||| | |
Sbjct 14818 TGGTCTTTAAGGGAGAAAAGAAAACCTTTACTCCAGAGGAAATTAGTTCAATGGTTTTGA 14759
Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331
|||||||||||||| |||||| || | || || ||| | || ||||| || |
Sbjct 14758 TGAAAATGAAAGAAACTGCAGAAGCCTACTTAGGATCGCCAACGAAAGACGCAGTCATCA 14699
Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA--CATAT 451389
| ||||| ||||| || ||||| | || | ||||| || |||||||| ||| |||||
Sbjct 14698 CAGTTCCAGCTTACTTTAATGACTCTCAGAGACAAGCTACAAAAGATGCTGGAGCCATAT 14639
Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
|||| | |||||| | |||| |||||||| || || ||||||||| | ||||| ||
Sbjct 14638 --CTGGACTTAATGTTTTGAGAATAATTAATGAGCCAACTGCAGCTGCTTTGGCATACGG 14581
Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509
|| ||| || || || | |||| |||| |||| |||||||||| || || ||
Sbjct 14580 -CTTGGATAA--GAATCTAAGTGGTGAAAGAAATGTTTTGATATTTGATTTAGGAGGCGG 14524
Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAAC 451566
|||| |||| ||| | | | ||||| || || |||||||||||||||| ||
Sbjct 14523 AACTTTTGATGTTTCAATCTTGACCATTGATGAAGGTTCCTTATTTGAAGTAAAGGCTAC 14464
Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||| || |||||| |||| ||||||||| |||||||
Sbjct 14463 AGCTGGAGACACTCATTTAGGTGGTGAAGATTTTGATAA 14425
Score = 168 bits (186), Expect = 3e-36
Identities = 271/380 (71%), Gaps = 12/380 (3%)
Strand=Plus/Plus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050
||||| |||||||| ||||| ||||| ||||| |||||| ||||||||| | || ||
Sbjct 3696 AATCCAGATGAAGCCGTTGCTTATGGAGCTGCTATTCAAGGAGCTATTCTTTCTGGATCT 3755
Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110
| ||| ||| | |||| | || | || ||||| ||||| |||||| | || ||
Sbjct 3756 AAAGATTCCAAAATTCAAGATGTACTTCTTGTTGATGTCACACCACTATCTTTGGGCATT 3815
Query 452111 GAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTC---TATTCCTTGT 452167
||||||||||| || | |||||||| || ||| | |||||| ||| ||||| ||
Sbjct 3816 GAAACAGCTGGAGGTGTTATGACTAAGTTGATTGA--GAGGAA-TTCAAGAATTCCATGC 3872
Query 452168 AAAAAGAGTCAAACATTTAGTACAGC--AAG-TGATAACCAACCAGGTGTAACTATTCAA 452224
||| | || |||| | || ||| | | | |||||| ||||||| |||||| ||||||
Sbjct 3873 AAACA-AG-CAAAAACTT-TCACAACCTACGCTGATAATCAACCAGCTGTAACAATTCAA 3929
Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTT 452284
|| |||||||| ||| | |||||||| |||||| ||| || ||| ||| | | |
Sbjct 3930 GTATTTGAAGGTGAAAGAGCAATGACCAAAGATAACAATCTTCTGGGAACATTCAATTTG 3989
Query 452285 TCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGAT 452344
| |||||||| || || || | || ||||||||| | || | |||| | ||
Sbjct 3990 ACTGGAATTCCTCCAGCTCCTAGAGGCATACCACAAATTGAAGTCACTTTTGATTTGGAC 4049
Query 452345 GCAAATGGTATTCTTAATGT 452364
|| ||||| ||| | |||||
Sbjct 4050 GCCAATGGAATTTTAAATGT 4069
Score = 113 bits (124), Expect = 2e-19
Identities = 205/297 (69%), Gaps = 6/297 (2%)
Strand=Plus/Minus
Query 452197 TGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGA 452256
|||||||||| | | ||||| |||||||| |||||||||||||| || ||||| |||
Sbjct 17806 TGATAACCAATCTGCAGTAACCATTCAAGTTTTTGAAGGAGAACGAGCTATGACTAAAGA 17747
Query 452257 TAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCC 452316
||||||| ||| ||| || |||||| || || || | || || |||
Sbjct 17746 TAATAATTTACTTGGAACTTTCGATCTTTCGGGAATACCCCCAGCATCTAGAGGTGTTCC 17687
Query 452317 TCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGA 452376
||||||||| | || | || | || || ||||| || | ||||| | ||| | |
Sbjct 17686 TCAAATTGACGTCACTTTCGACCTCGACGCTAATGGAATATTGAATGTAACTGC---TAA 17630
Query 452377 AAAA--TCATCTGGAAAATCAGAAAAA-ATTACAATTACTAATGATAAAAACCGTTTATC 452433
| || | | | |||| |||||| ||||| || | ||||||||| | | |||||
Sbjct 17629 AGAACTTGGTACCGGAAATGTGAAAAATATTACTATCAAAAATGATAAAGGCAGATTATC 17570
Query 452434 TAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490
| ||| |||||| ||| |||| | |||||| ||||| ||||| || || || ||
Sbjct 17569 TCAAGCTGATATTCAAAGAATGCTTAGTGAAGCTGAAAAGTTCAAAGACGAAGACGA 17513
>seq229830
Length=7395
Score = 161 bits (178), Expect = 4e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || ||||||||||||| ||||| | || |||||| ||||
Sbjct 5559 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACCATCC 5618
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | ||||| |||||||| || ||||||||||| || || || ||
Sbjct 5619 GATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGACCAG 5678
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || ||| | || |||||| | ||||||||| | |||||| ||||| ||
Sbjct 5679 CAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTACAAC 5738
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261
||| | || || |||| |||||||| |||||
Sbjct 5739 ATTCAAAAAGAATCAACCCTTCACTTGGTATT 5770
Score = 140 bits (154), Expect = 1e-27
Identities = 166/225 (74%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| ||||||| ||||| || || | || ||||| | |||
Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| |||| || || ||||| || ||||| |||||||| ||||||
Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || || | || |||||| | ||||| ||| | || ||| | || |||||
Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCAGACTATAAC 5966
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274
||| | || || | ||||| || ||||||||| | || ||||||
Sbjct 5967 ATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGA 6011
Score = 98.7 bits (108), Expect = 4e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 391152 GGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGA 391211
|| |||||||| |||||||||||||| |||||| | || |||||| | ||||||||| |
Sbjct 7279 GGTATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGCAAACAATTGGAAGATGGACGC 7338
Query 391212 ACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258
|| ||| | |||||||| || | ||||| |||| |||||||| ||
Sbjct 7339 ACATTGTCAGATTATAACATCCAAAAGGAGTCAACTCTTCACTTGGT 7385
>seq160753
Length=592
Score = 161 bits (178), Expect = 4e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| ||||||| |||||||| || ||||| ||||| ||||
Sbjct 363 ATGCAGATTTTCGTCAAAACTTTGACTGGAAAAACTATCACCCTTGAAGTTGAGCCATCA 304
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| |||| || ||||||||||||||||| || ||||| ||||||
Sbjct 303 GACACCATTGAGAACGTTAAGGCTAAGATTCAAGATAAGGAAGGTATCCCTCCAGATCAA 244
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||||| || ||| | || || || | ||||||||| | || ||| | ||||||||
Sbjct 243 CAACGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGCACATTGTCAGATTATAAC 184
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261
||| | ||||| |||| ||||| || |||||
Sbjct 183 ATTCAAAAGGAGTCAACCCTTCATTTGGTATT 152
Score = 95.1 bits (104), Expect = 5e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| |||||||||| || || ||| | || |||||| ||||
Sbjct 135 ATGCAAATCTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTAGAAGTTGAACCATCA 76
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||| || |||| || ||||| ||||||||||| || ||||| ||||||
Sbjct 75 GACACCATCGAGAACGTTAAGGCTAAGATTCAGGATAAGGAAGGTATCCCTCCAGATCAA 16
Query 391170 CAACGTTTAATTTTC 391184
|||||||| || |||
Sbjct 15 CAACGTTTGATCTTC 1
>seq230305
Length=8917
Score = 159 bits (176), Expect = 1e-33
Identities = 207/286 (72%), Gaps = 9/286 (3%)
Strand=Plus/Minus
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
|||| ||||| |||||||| |||||| | ||||| ||||| || || ||||| ||||| |
Sbjct 3565 TTACAGTTCCAGCTTATTTTAATGATTCCCAACGTCAAGCCACAAAGGATGCTGGACAAA 3506
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
||||||| || |||||| | || | || || ||||||||||| |||||| | || ||||
Sbjct 3505 TTGCTGGATTGAATGTTTTGCGTGTCATCAACGAACCTACAGCCGCTGCTTTGGCCTATG 3446
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
| | ||| | | || ||||| |||| ||| || | ||||| ||||| |
Sbjct 3445 GTAT-GGACA--------AGACTGAAGACAAAATTATCGCTGTCTACGATTTGGGTGGTG 3395
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
|||| |||| |||| | | ||| || | || || |||||||||||| | ||||
Sbjct 3394 GAACCTTTGATGTTTCTATTTTGGAAATCCAAAAGGGTGTGTTTGAAGTAAAGTCCACCA 3335
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614
||||||| ||| | || || |||||| ||||||||| |||||
Sbjct 3334 ATGGTGACACTTTGTTGGGTGGAGAAGATTTTGATAATGTGATTGT 3289
>seq80618
Length=357
Score = 127 bits (140), Expect = 8e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | |||||||| || || |||||||||| || ||||| | || |||||| | ||
Sbjct 123 AATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTTGAACCTTC 182
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|| | ||||||| | | || || || ||||| || |||||||| || || |||||
Sbjct 183 CGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCA 242
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||||||||| || ||| | || || ||| | ||||||||| | || ||| | || || ||
Sbjct 243 ACAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGTCCGACTACAA 302
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261
|| | ||||| | || |||||||| || ||
Sbjct 303 CATCCAAAAGGAATCTACCCTTCACTTGGTGTT 335
>seq48319
Length=4704
Score = 125 bits (138), Expect = 3e-23
Identities = 170/235 (72%), Gaps = 3/235 (1%)
Strand=Plus/Minus
Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429
|| || ||||| ||| || ||||| | |||||||| |||| || |||||||| ||
Sbjct 653 ACAAAGGATGCTGGAACAATAGCTGGACTCAATGTTCTGAGAATAATAAATGAACCAACT 594
Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTA 451489
|||||||| ||||||||||| | ||| || || || ||| | | |||| ||||
Sbjct 593 GCAGCTGCAATAGCATATGGA-TTGGACAA--GAATATCACTGAAAACAGAAATGTTTTG 537
Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549
| |||||||| || ||||| ||| |||| ||| |||| ||||| ||| ||
Sbjct 536 ATCTTTGATTTGGGAGGAGGCACTTTTGATGTTTCAATACTAACAATTAAAGGATCTGTG 477
Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604
|||||||| ||||| ||| ||| || || ||| | ||||| |||||| ||||||
Sbjct 476 TTTGAAGTGAAGGCCACCGCTGGAGACACCCATTTGGGAGGAGAAGATTTTGATA 422
>seq56983
Length=242
Score = 93.3 bits (102), Expect = 2e-13
Identities = 79/96 (82%), Gaps = 1/96 (1%)
Strand=Plus/Minus
Query 450905 AAAAAAGT-AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCA 450963
||||| || |||||||||||||||| | ||||| |||| || ||||| || || | |||
Sbjct 136 AAAAATGTCAGCAATTGGAATTGATTTAGGAACAACCTACTCCTGTGTTGGAGTCTTCCA 77
Query 450964 AAATGGAAATGTAGAAATTATAGCAAATGACCAAGG 450999
| |||| || |||||||| ||||| |||||||||||
Sbjct 76 ACATGGCAAAGTAGAAATCATAGCCAATGACCAAGG 41
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1969869853078428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |