Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq5251 242 1e-58 seq229830 161 4e-34 seq160753 161 4e-34 seq230305 159 1e-33 seq80618 127 8e-24 seq48319 125 3e-23 seq56983 93.3 2e-13 >seq5251 Length=17865 Score = 242 bits (268), Expect = 1e-58 Identities = 478/699 (68%), Gaps = 15/699 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||||||||||| || | ||||| || | ||| ||||| || | | ||| |||||||| Sbjct 15115 GCAATTGGAATCGACTTGGGAACAACATATTCCTGTGTTGGAATATTCCAGAATGGAAAA 15056 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || ||||| ||||| || || || ||| |||||||||| | || | ||||| Sbjct 15055 GTCGAAATAATAGCTAACGATCATGGAAATAGAACTACTCCAAGTTACGTTGGCTTTACT 14996 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAAAT--CAATGGTAAATTCAAATGCCAAAA 451091 || || ||| | || | || | ||||||| ||| || | || |||||| Sbjct 14995 GACTCTGAACGCCTCATTGGAGACAATGCTAAAAGCCAA--GTTGCTATGAACCCCAAAA 14938 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 | || || | ||||| || ||||||||||| || | | |||||| || | ||| Sbjct 14937 ATACCGTTTTCGATGCAAAGCGTTTAATTGGACGAAAATTCGATGATCCTAAGATCCAAG 14878 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 | || | || || | | | | || || ||| || |||||| || | | || | Sbjct 14877 AGGACATGAAGTTATGGCCATCAAA-GTTGTTAATGAAGGAGGAAAACCAAAAGTACAGG 14819 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271 | | ||| || |||| ||||| ||| |||| || |||||| || |||||| | | Sbjct 14818 TGGTCTTTAAGGGAGAAAAGAAAACCTTTACTCCAGAGGAAATTAGTTCAATGGTTTTGA 14759 Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331 |||||||||||||| |||||| || | || || ||| | || ||||| || | Sbjct 14758 TGAAAATGAAAGAAACTGCAGAAGCCTACTTAGGATCGCCAACGAAAGACGCAGTCATCA 14699 Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA--CATAT 451389 | ||||| ||||| || ||||| | || | ||||| || |||||||| ||| ||||| Sbjct 14698 CAGTTCCAGCTTACTTTAATGACTCTCAGAGACAAGCTACAAAAGATGCTGGAGCCATAT 14639 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 |||| | |||||| | |||| |||||||| || || ||||||||| | ||||| || Sbjct 14638 --CTGGACTTAATGTTTTGAGAATAATTAATGAGCCAACTGCAGCTGCTTTGGCATACGG 14581 Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 || ||| || || || | |||| |||| |||| |||||||||| || || || Sbjct 14580 -CTTGGATAA--GAATCTAAGTGGTGAAAGAAATGTTTTGATATTTGATTTAGGAGGCGG 14524 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAAC 451566 |||| |||| ||| | | | ||||| || || |||||||||||||||| || Sbjct 14523 AACTTTTGATGTTTCAATCTTGACCATTGATGAAGGTTCCTTATTTGAAGTAAAGGCTAC 14464 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || |||||| |||| ||||||||| ||||||| Sbjct 14463 AGCTGGAGACACTCATTTAGGTGGTGAAGATTTTGATAA 14425 Score = 168 bits (186), Expect = 3e-36 Identities = 271/380 (71%), Gaps = 12/380 (3%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||| |||||||| ||||| ||||| ||||| |||||| ||||||||| | || || Sbjct 3696 AATCCAGATGAAGCCGTTGCTTATGGAGCTGCTATTCAAGGAGCTATTCTTTCTGGATCT 3755 Query 452051 GATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTT 452110 | ||| ||| | |||| | || | || ||||| ||||| |||||| | || || Sbjct 3756 AAAGATTCCAAAATTCAAGATGTACTTCTTGTTGATGTCACACCACTATCTTTGGGCATT 3815 Query 452111 GAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTC---TATTCCTTGT 452167 ||||||||||| || | |||||||| || ||| | |||||| ||| ||||| || Sbjct 3816 GAAACAGCTGGAGGTGTTATGACTAAGTTGATTGA--GAGGAA-TTCAAGAATTCCATGC 3872 Query 452168 AAAAAGAGTCAAACATTTAGTACAGC--AAG-TGATAACCAACCAGGTGTAACTATTCAA 452224 ||| | || |||| | || ||| | | | |||||| ||||||| |||||| |||||| Sbjct 3873 AAACA-AG-CAAAAACTT-TCACAACCTACGCTGATAATCAACCAGCTGTAACAATTCAA 3929 Query 452225 GTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTT 452284 || |||||||| ||| | |||||||| |||||| ||| || ||| ||| | | | Sbjct 3930 GTATTTGAAGGTGAAAGAGCAATGACCAAAGATAACAATCTTCTGGGAACATTCAATTTG 3989 Query 452285 TCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGAT 452344 | |||||||| || || || | || ||||||||| | || | |||| | || Sbjct 3990 ACTGGAATTCCTCCAGCTCCTAGAGGCATACCACAAATTGAAGTCACTTTTGATTTGGAC 4049 Query 452345 GCAAATGGTATTCTTAATGT 452364 || ||||| ||| | ||||| Sbjct 4050 GCCAATGGAATTTTAAATGT 4069 Score = 113 bits (124), Expect = 2e-19 Identities = 205/297 (69%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 452197 TGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGA 452256 |||||||||| | | ||||| |||||||| |||||||||||||| || ||||| ||| Sbjct 17806 TGATAACCAATCTGCAGTAACCATTCAAGTTTTTGAAGGAGAACGAGCTATGACTAAAGA 17747 Query 452257 TAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCC 452316 ||||||| ||| ||| || |||||| || || || | || || ||| Sbjct 17746 TAATAATTTACTTGGAACTTTCGATCTTTCGGGAATACCCCCAGCATCTAGAGGTGTTCC 17687 Query 452317 TCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGA 452376 ||||||||| | || | || | || || ||||| || | ||||| | ||| | | Sbjct 17686 TCAAATTGACGTCACTTTCGACCTCGACGCTAATGGAATATTGAATGTAACTGC---TAA 17630 Query 452377 AAAA--TCATCTGGAAAATCAGAAAAA-ATTACAATTACTAATGATAAAAACCGTTTATC 452433 | || | | | |||| |||||| ||||| || | ||||||||| | | ||||| Sbjct 17629 AGAACTTGGTACCGGAAATGTGAAAAATATTACTATCAAAAATGATAAAGGCAGATTATC 17570 Query 452434 TAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 | ||| |||||| ||| |||| | |||||| ||||| ||||| || || || || Sbjct 17569 TCAAGCTGATATTCAAAGAATGCTTAGTGAAGCTGAAAAGTTCAAAGACGAAGACGA 17513 >seq229830 Length=7395 Score = 161 bits (178), Expect = 4e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||||||||||| ||||| | || |||||| |||| Sbjct 5559 ATGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACCATCC 5618 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| | ||||| |||||||| || ||||||||||| || || || || Sbjct 5619 GATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGACCAG 5678 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || |||||| | ||||||||| | |||||| ||||| || Sbjct 5679 CAACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTACAAC 5738 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | || || |||| |||||||| ||||| Sbjct 5739 ATTCAAAAAGAATCAACCCTTCACTTGGTATT 5770 Score = 140 bits (154), Expect = 1e-27 Identities = 166/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| ||||||| ||||| || || | || ||||| | ||| Sbjct 5787 ATGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCT 5846 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| |||| || || ||||| || ||||| |||||||| |||||| Sbjct 5847 GACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 5906 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || || | || |||||| | ||||| ||| | || ||| | || ||||| Sbjct 5907 CAACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCAGACTATAAC 5966 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 ||| | || || | ||||| || ||||||||| | || |||||| Sbjct 5967 ATTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGA 6011 Score = 98.7 bits (108), Expect = 4e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 391152 GGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGA 391211 || |||||||| |||||||||||||| |||||| | || |||||| | ||||||||| | Sbjct 7279 GGTATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGCAAACAATTGGAAGATGGACGC 7338 Query 391212 ACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 || ||| | |||||||| || | ||||| |||| |||||||| || Sbjct 7339 ACATTGTCAGATTATAACATCCAAAAGGAGTCAACTCTTCACTTGGT 7385 >seq160753 Length=592 Score = 161 bits (178), Expect = 4e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| ||||||| |||||||| || ||||| ||||| |||| Sbjct 363 ATGCAGATTTTCGTCAAAACTTTGACTGGAAAAACTATCACCCTTGAAGTTGAGCCATCA 304 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| |||| || ||||||||||||||||| || ||||| |||||| Sbjct 303 GACACCATTGAGAACGTTAAGGCTAAGATTCAAGATAAGGAAGGTATCCCTCCAGATCAA 244 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| || ||| | || || || | ||||||||| | || ||| | |||||||| Sbjct 243 CAACGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGACGCACATTGTCAGATTATAAC 184 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATT 391261 ||| | ||||| |||| ||||| || ||||| Sbjct 183 ATTCAAAAGGAGTCAACCCTTCATTTGGTATT 152 Score = 95.1 bits (104), Expect = 5e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| |||||||||| || || ||| | || |||||| |||| Sbjct 135 ATGCAAATCTTCGTCAAAACCTTGACTGGTAAGACCATCACTTTAGAAGTTGAACCATCA 76 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || |||| || ||||| ||||||||||| || ||||| |||||| Sbjct 75 GACACCATCGAGAACGTTAAGGCTAAGATTCAGGATAAGGAAGGTATCCCTCCAGATCAA 16 Query 391170 CAACGTTTAATTTTC 391184 |||||||| || ||| Sbjct 15 CAACGTTTGATCTTC 1 >seq230305 Length=8917 Score = 159 bits (176), Expect = 1e-33 Identities = 207/286 (72%), Gaps = 9/286 (3%) Strand=Plus/Minus Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 |||| ||||| |||||||| |||||| | ||||| ||||| || || ||||| ||||| | Sbjct 3565 TTACAGTTCCAGCTTATTTTAATGATTCCCAACGTCAAGCCACAAAGGATGCTGGACAAA 3506 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 ||||||| || |||||| | || | || || ||||||||||| |||||| | || |||| Sbjct 3505 TTGCTGGATTGAATGTTTTGCGTGTCATCAACGAACCTACAGCCGCTGCTTTGGCCTATG 3446 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | | ||| | | || ||||| |||| ||| || | ||||| ||||| | Sbjct 3445 GTAT-GGACA--------AGACTGAAGACAAAATTATCGCTGTCTACGATTTGGGTGGTG 3395 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 |||| |||| |||| | | ||| || | || || |||||||||||| | |||| Sbjct 3394 GAACCTTTGATGTTTCTATTTTGGAAATCCAAAAGGGTGTGTTTGAAGTAAAGTCCACCA 3335 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 ||||||| ||| | || || |||||| ||||||||| ||||| Sbjct 3334 ATGGTGACACTTTGTTGGGTGGAGAAGATTTTGATAATGTGATTGT 3289 >seq80618 Length=357 Score = 127 bits (140), Expect = 8e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || |||||||||| || ||||| | || |||||| | || Sbjct 123 AATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACCTTGGAAGTTGAACCTTC 182 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||||| | | || || || ||||| || |||||||| || || ||||| Sbjct 183 CGACACCATTGAAAATGTCAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCA 242 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||| || ||| | || || ||| | ||||||||| | || ||| | || || || Sbjct 243 ACAACGTTTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGCACCTTGTCCGACTACAA 302 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || |||||||| || || Sbjct 303 CATCCAAAAGGAATCTACCCTTCACTTGGTGTT 335 >seq48319 Length=4704 Score = 125 bits (138), Expect = 3e-23 Identities = 170/235 (72%), Gaps = 3/235 (1%) Strand=Plus/Minus Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 || || ||||| ||| || ||||| | |||||||| |||| || |||||||| || Sbjct 653 ACAAAGGATGCTGGAACAATAGCTGGACTCAATGTTCTGAGAATAATAAATGAACCAACT 594 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTA 451489 |||||||| ||||||||||| | ||| || || || ||| | | |||| |||| Sbjct 593 GCAGCTGCAATAGCATATGGA-TTGGACAA--GAATATCACTGAAAACAGAAATGTTTTG 537 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTA 451549 | |||||||| || ||||| ||| |||| ||| |||| ||||| ||| || Sbjct 536 ATCTTTGATTTGGGAGGAGGCACTTTTGATGTTTCAATACTAACAATTAAAGGATCTGTG 477 Query 451550 TTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 |||||||| ||||| ||| ||| || || ||| | ||||| |||||| |||||| Sbjct 476 TTTGAAGTGAAGGCCACCGCTGGAGACACCCATTTGGGAGGAGAAGATTTTGATA 422 >seq56983 Length=242 Score = 93.3 bits (102), Expect = 2e-13 Identities = 79/96 (82%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 450905 AAAAAAGT-AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCA 450963 ||||| || |||||||||||||||| | ||||| |||| || ||||| || || | ||| Sbjct 136 AAAAATGTCAGCAATTGGAATTGATTTAGGAACAACCTACTCCTGTGTTGGAGTCTTCCA 77 Query 450964 AAATGGAAATGTAGAAATTATAGCAAATGACCAAGG 450999 | |||| || |||||||| ||||| ||||||||||| Sbjct 76 ACATGGCAAAGTAGAAATCATAGCCAATGACCAAGG 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1969869853078428