Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5251 255 4e-62 seq48319 170 1e-36 seq204644 161 7e-34 seq17427 147 2e-29 seq29971 143 2e-28 seq230305 127 2e-23 seq80136 122 7e-22 seq8958 120 2e-21 seq31561 105 5e-17 seq39111 100 2e-15 seq194447 89.7 4e-12 >seq5251 Length=17865 Score = 255 bits (282), Expect = 4e-62 Identities = 519/758 (68%), Gaps = 26/758 (3%) Strand=Plus/Plus Query 517970 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTAT 518027 ||||| ||||||| || | |||||| || || || | ||| | || | ||| |||| Sbjct 14371 AAATCCTTTTTATACTTGCGCTTGAATTCATCGGCAAA--ATGGTTAACCAAACGGTTAT 14428 Query 518028 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA-AAGT--C 518084 ||||||||||||| || || | ||| | ||| | ||||| |||||| || ||| | Sbjct 14429 CAAAATCTTCACCACCTAAATGAGTGTCTCCAGCTGTAGCCTTTACTTCAAATAAGGAAC 14488 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || |||| | ||| | | |||||| ||||| || || | |||||| || | | Sbjct 14489 CTTCATCAATGGTCAAGATTGAAACATCAAAAGTTCCGCCTCCTAAATCAAATATCAAAA 14548 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 |||| |||| | | || ||||| | || || || |||||||| |||||||| | Sbjct 14549 CATTTCTTTCACCACTTAGATTCTTATCCAAGCCGTATGCCAAAGCAGCTGCAGTTGGCT 14608 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 ||||||| ||||||||||||||||| |||| || ||| |||||||| || ||||||| Sbjct 14609 CATTAATTATTCTCAAAACATTAAGTCCAGATATGGCTCCAGCATCTTTTGTAGCTTGTC 14668 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 | || || || ||||| || || ||||| || || || || || ||| || | | Sbjct 14669 TCTGAGAGTCATTAAAGTAAGCTGGAACTGTGATGACTGCGTC-----TTTCGTTGGCGA 14723 Query 518325 T-ATAAG--CGCT--TGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTC 518379 | |||| ||| ||| |||| ||||||||| | |||| |||||| ||||| || Sbjct 14724 TCCTAAGTAGGCTTCTGCAGTTTCTTTCATTTTCATCAAAACCATTGAACTAATTTCCTC 14783 Query 518380 TGGGGAATA---TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACC 518436 ||| | | | || ||| ||| | | | || | | | |||||| || Sbjct 14784 TGGAGTAAAGGTTTTCTT---TTCTCCCTTAAAGACCACCTGTACTTTTGGTTTTCCTCC 14840 Query 518437 AACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG-TCATTAA 518495 |||||| |||||| ||||||| | ||||| || ||| | ||| || |||| | Sbjct 14841 TTCATTAACAACTTT-GATGGCCATAACTTCATGTCCTCTTGGA-TCTTAGGATCATCGA 14898 Query 518496 AATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTT 518555 | | || |||||||| || |||||||| |||| ||||| | || || || ||| ||| Sbjct 14899 ATTTTCGTCCAATTAAACGCTTTGCATCGAAAACGGTATTTTTGGGGTTCATAGCAACTT 14958 Query 518556 GATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAG 518615 | ||| || |||||||| || |||| | || ||||| ||| || ||||| Sbjct 14959 GGCTTTTAGCATTGTCTCCAATGAGGCGTTCAGAGTCAGTAAAGCCAACGTAACTTGGAG 15018 Query 518616 TTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTA 518675 | || | ||| || ||||| || || || ||||| ||||| ||||| || ||| || | Sbjct 15019 TAGTTCTATTTCCATGATCGTTAGCTATTATTTCGACTTTTCCATTCTGGAATATTCCAA 15078 Query 518676 CACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 |||| | | |||||||| || || || ||||| ||| Sbjct 15079 CACAGGAATATGTTGTTCCCAAGTCGATTCCAATTGCA 15116 Score = 246 bits (272), Expect = 2e-59 Identities = 281/375 (75%), Gaps = 2/375 (1%) Strand=Plus/Minus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 ||||| | ||| |||||||| ||||||||||| |||||||||||||| || | ||||| Sbjct 4069 ACATTTAAAATTCCATTGGCGTCCAAATCAAAAGTGACTTCAATTTGTGGTATGCCTCTA 4010 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 |||| || || || || |||||| |||||||||||| ||| |||||||| || | | Sbjct 4009 GGAGCTGGAGGAATTCCAGTCAAATTGAATGTTCCCAGAAGATTGTTATCTTTGGTCATT 3950 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 || |||||| || || | ||| || || || | | ||||||||| | || ||||| Sbjct 3949 GCTCTTTCACCTTCAAATACTTGAATTGTTACAGCTGGTTGATTATCAGCGTAGGTTGTG 3890 Query 517445 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 517504 || | | | || ||| || |||||| ||| || || ||||| | || ||||||| | Sbjct 3889 AAAGTTTTTGCTTGTTTGCATGGAATTCTTGAATTCCTCTCAATCAACTTAGTCATAACA 3830 Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 || || |||||||| | || | ||| || || ||||||||||| || | | || |||| Sbjct 3829 CCTCCAGCTGTTTCAATGCCCAAAGATAGTGGTGTGACATCAACAAGAAGTACATCTTGA 3770 Query 517565 AGTTTTTCATCAGTTTGA-CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 | ||| ||| || || ||| |||||||||| ||||||||||||| ||||| ||||| Sbjct 3769 ATTTTGGAATCT-TTAGATCCAGAAAGAATAGCTCCTTGAATAGCAGCTCCATAAGCAAC 3711 Query 517624 AGCTTCATCAGGATT 517638 |||||||| ||||| Sbjct 3710 GGCTTCATCTGGATT 3696 Score = 114 bits (126), Expect = 1e-19 Identities = 238/351 (68%), Gaps = 14/351 (4%) Strand=Plus/Plus Query 517142 TCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAAT 517201 ||| | |||| || | || |||||| |||| |||||| | ||| | | ||| ||| ||| Sbjct 17516 TCTTCGTCTTTGAACTTTTCAGCTTCACTAAGCATTCTTTGAATATCAGCTTGAGATAAT 17575 Query 517202 CTTCCGCGATTATTAGTAATAGTAATATTCTTGG-ATTT---GTTT---GTTGATTTATC 517254 || || || ||| | ||||||||||| || |||| || ||| |||| Sbjct 17576 CTGCCTTTATCATTTTTGATAGTAATATTTTTCACATTTCCGGTACCAAGTTC-TTTA-- 17632 Query 517255 AGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGG 517314 ||||| ||||| | || ||||| || || | || || ||||| ||||||||||| Sbjct 17633 ----GCAGTTACATTCAATATTCCATTAGCGTCGAGGTCGAAAGTGACGTCAATTTGAGG 17688 Query 517315 GACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATC 517374 || ||||| || || || || || | || || ||||| || ||||||||| Sbjct 17689 AACACCTCTAGATGCTGGGGGTATTCCCGAAAGATCGAAAGTTCCAAGTAAATTATTATC 17748 Query 517375 TTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGA 517434 |||||| | |||||| || || |||| ||| || || ||| ||| ||| ||||| Sbjct 17749 TTTAGTCATAGCTCGTTCTCCTTCAAAAACTTGAATGGTTACTGCAGATTGGTTATCATC 17808 Query 517435 ATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATC 517485 ||| || || || | | | | || || ||||| ||| | | |||||| || Sbjct 17809 ATATGTAGTGAAAATTTTAGTTTGCTTGCAAGGTATTCTAGAGTTTCTCTC 17859 >seq48319 Length=4704 Score = 170 bits (188), Expect = 1e-36 Identities = 439/655 (67%), Gaps = 14/655 (2%) Strand=Plus/Plus Query 517609 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 517668 ||| ||||| |||| ||||||||| || || | || |||| | || |||||||| Sbjct 6 AGCTCCATAAGCAATAGCTTCATCTGGGTTGATAGACAAGTTTAAAGTCTTTCCATTGAA 65 Query 517669 AAA-ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 517727 ||| |||||| ||||| | | || || ||||| | | |||||||| ||||| || | Sbjct 66 AAAGTTTTGAATTAAGTT-TTTAACTTTTGGAATTCTTGTAGATCCTCCTACTAAAACGA 124 Query 517728 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 517787 |||| | || || || |||| ||| | |||| |||| | || || || || || | Sbjct 125 CATCATCAATTTGAGACTTTTCCATTTTAGCATCCTTTAAAGCCTTCTCTACAGGATCTA 184 Query 517788 GACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 517847 | | | ||| || || | || ||||||||||||||| || | || | | || Sbjct 185 AAGTTTCACGAAATAAATCAGCGTTAATTTCTTCGAATTTAGCCCT-GGAAATTTTAGAT 243 Query 517848 T-ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 517906 | | ||||||||||||| ||| || ||| | |||||| | | || || | | || Sbjct 244 TGAAAATCAATTCCTTCATACAGAGCATCGATTTCAATATTGGCTTCAGAACTAAACGAC 303 Query 517907 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG- 517965 |||| ||| || || |||||| || || |||| | || | || | | ||||| Sbjct 304 AGTGAACGCTTTGCTCGTTCAGCAGCAGTTCTTAAGCGACGAAGAGCCCTGG--GATTGG 361 Query 517966 -ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGACG 518022 | ||||| | | || |||| ||| || |||||||| || ||| | || | ||| Sbjct 362 AGCTTAAATCCTTCTGATTCTTTCGCTTAAATTCTTCAAC-CA-AATGCTTCAACAAACG 419 Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 | ||||||||||||| |||||||| | || | ||| | || || | |||| || | Sbjct 420 AGTATCAAAATCTTCTCCTCCCAAATGGGTGTCTCCAGCGGTGGCCTTCACTTCAAACAC 479 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 ||| || | | | | |||||| || || || |||| |||||| || | Sbjct 480 AGATCCTTTAATTGTTAGTATTGAAACATCAAAAGTGCCTCCTCCCAAATCAAAGATCAA 539 Query 518143 TACA-TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 ||| ||| || | || | || || || | ||||| || | ||||| ||||||| Sbjct 540 AACATTTCTGTTTTCAGTGAT-ATTCTTGTCCAATCCATATGCTATTGCAGCTGCAGTTG 598 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 518256 ||||||| || ||||||| |||||| || ||||| ||| |||| ||||| || || Sbjct 599 GTTCATTTATTATTCTCAGAACATTGAGTCCAGCTATTGTTCCAGCATCCTTTGT 653 >seq204644 Length=969 Score = 161 bits (178), Expect = 7e-34 Identities = 146/184 (79%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 870796 AATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAG 870855 |||| | || |||| ||| |||||||||||||| ||| |||||||| ||||||||||||| Sbjct 456 AATTCTAGTAGATTTTTCATCTCCAAATATTGCAAAACAAATGCATGTTGGACATTTAAG 397 Query 870856 ATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTA 870915 ||| ||||||||||||||||| |||||||| | | ||| | ||||| || |||| Sbjct 396 ATCTACTATTATTGGTGAATCAATTTGTAGACTTCTTGAATACTTAGGACATGACGTTTT 337 Query 870916 TCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATTAA 870975 | | |||||| | || |||||||| |||||||| || |||||||| ||| ||||| | Sbjct 336 AAGAACAAATCATATCGGAGATTGGGGGACTCAATTTGGAATGTTAATAGCTCATATTCA 277 Query 870976 AAAT 870979 | || Sbjct 276 AGAT 273 >seq17427 Length=18297 Score = 147 bits (162), Expect = 2e-29 Identities = 214/300 (71%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 634312 GGAAATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGC 634371 ||| ||||| ||||| || ||| |||||||||||| |||||| | | || |||||||| Sbjct 4471 GGATATTACATATGTGCCAGGTTTATATAAAATTTTCGATGAAATCCTGGTTAATGCGGC 4412 Query 634372 AGATCATAACAAGAGATGTCAAAC-ATGTAATATTATCAAAGTTGATATCGATCAAAAAA 634430 ||| |||| | || | || | ||| | || ||| ||| ||||||| ||| || | | Sbjct 4411 CGATAATAAGCAAAGGGATAAATCGATG-AGTACTATTAAAATTGATATTGATAAAGAGA 4353 Query 634431 CAGGTCAAATTTCTGTTTGGAATAATGGTGATGGTATTGATGTAGCAATTCATAAAGAAC 634490 | | |||||| ||||||| |||||||| || ||| |||| || |||||||| Sbjct 4352 AAAATGTAATTTCAATTTGGAACAATGGTGAAGGGATTCCCGTAGTTATGCATAAAGAGG 4293 Query 634491 ATAATATATGGGTACCATCAATGATTTTTGGAGAACTTTTAACGTCTACTAATTACGATA 634550 | || || | || || | ||||||||||| | || ||||| ||| | || |||||| Sbjct 4292 AAAAAATGTATGTCCCCACTATGATTTTTGGCCATCTCTTAACTTCTTCAAACTACGATG 4233 Query 634551 AAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGTTTTGGCGCTAAGCTTGCTAATATTT 634610 | ||||| ||||| | ||||| | ||| |||| |||||||| | |||||||| Sbjct 4232 ACAACGAAGAAAAGGTTACAGGTGGAAGAAACGGTTACGGCGCTAAATTATGTAATATTT 4173 >seq29971 Length=14086 Score = 143 bits (158), Expect = 2e-28 Identities = 323/482 (67%), Gaps = 15/482 (3%) Strand=Plus/Minus Query 518235 CAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAG 518294 |||| | || ||||| || || ||||| ||| || || || || || || ||||||| Sbjct 9011 CAATGGTACCAGCATCCTTCGTAGCTTGAAGTTGGGAGTCATTGAAGTAAGCTGGAACAG 8952 Query 518295 TAATAACGGCATCAGTTACTTCTTTACC--AATATAAGCGCTT--GCCGTTTGTTTCATT 518350 | || || |||| | || ||| || | ||| | || || || | |||||| Sbjct 8951 TGATGACAGCATTGCTGACGGTTTTTCCCTAGTATGA----TTCAGCGGTCTCCTTCATT 8896 Query 518351 TTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATAT 518410 | | | ||||| ||||| | || ||||||| | ||| ||| ||||| | ||| Sbjct 8895 TAGGTGAGGATCATGGATGAGACTTCTTCTGGGAAGGATTTCTT---TTCATCCTTATAG 8839 Query 518411 GATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATA 518470 | |||| || | || ||| | || | | ||||| | ||||| || | ||||||| Sbjct 8838 GTAACTTGAACTTTTGATTTTCCATCAGCGCTGATAACATCGAATGGTCAATGTTTCATA 8779 Query 518471 TCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATA 518530 || ||| || | | || ||| | | | |||| || || |||| || || Sbjct 8778 TCACCTTGGACGGCTGGATCGCCAAATTTGCGGAAATTTAACCGCTTAACATCGAAGATT 8719 Query 518531 GTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC 518590 || || || || ||||| |||||| || || ||||||||||||| | |||| | Sbjct 8718 GT----GTGGGGTTCATTGCTACTTGATTCTTAGCAGCATCTCCAATCAAACGTTCACTT 8663 Query 518591 TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCA 518650 ||||| || | ||| |||||||| ||||| || |||||||| ||||| | ||| |||| Sbjct 8662 TCTGTGAAAGCAACGTATGATGGGGTTGTACGGTTACCTTGGTCATTGGAAATGATTTGG 8603 Query 518651 ACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 |||| |||| ||| | ||||| |||||| | || ||| | ||||||||||| | | Sbjct 8602 ACTTCTCCATGTTGGAACACACCGACACAAGGGTATGTGGTTTCCAAATCAATACCTACA 8543 Query 518711 GC 518712 || Sbjct 8542 GC 8541 >seq230305 Length=8917 Score = 127 bits (140), Expect = 2e-23 Identities = 197/282 (70%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 518023 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 ||||||||||||||| || ||||| ||| | || || | |||||| || | Sbjct 3297 ATTATCAAAATCTTCTCCACCCAACAAAGTGTCACCATTGGTGGACTTTACTTCAAACAC 3356 Query 518083 TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 || | || | ||||| || |||||| |||||||||||||| ||| | Sbjct 3357 ACCCTTTTGGATTTCCAAAATAGAAACATCAAAGGTTCCACCACCCAAATCGTA------ 3410 Query 518143 TACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 518202 ||| || |||||||| | || || | |||||| || |||||||| || || || Sbjct 3411 GACAGCGATAATTTTGTCTTCAGTCTTGTCCATACCATAGGCCAAAGCAGCGGCTGTAGG 3470 Query 518203 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262 ||| || || | | ||||||||| | ||||||||| ||| ||||| || |||||||| Sbjct 3471 TTCGTTGATGACACGCAAAACATTCAATCCAGCAATTTGTCCAGCATCCTTTGTGGCTTG 3530 Query 518263 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 518304 | ||| ||||| |||||||| || ||||| |||| ||| || Sbjct 3531 ACGTTGGGAATCATTAAAATAAGCTGGAACTGTAACAACAGC 3572 >seq80136 Length=355 Score = 122 bits (134), Expect = 7e-22 Identities = 224/326 (69%), Gaps = 2/326 (1%) Strand=Plus/Plus Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 517682 |||||||||| ||||| | | || |||| || ||||||||||||||| | | ||| | Sbjct 1 CAGCTTCATCGGGATTGATGGATTTGTTTAATTCTTTACCATTGAAAAAGTCTTGAAGTA 60 Query 517683 GTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 517741 | | ||| || || ||||| | || |||||| |||||||| ||||| |||| | ||| Sbjct 61 GCT-TCTGGACTTTTGGAATTCTAGTTGATCCACCAACTAAGACAATATCATTGATCTGG 119 Query 517742 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAAC 517801 |||||||| ||| | ||| | |||| || ||||| | | | | ||| Sbjct 120 CCTTTATCCATTTTAGCATCACGAAGGGCTTTAGATACAGGTTCCATAGTTCCACGGAAC 179 Query 517802 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCT 517861 || || | | || ||||| || |||||| || | || || | ||||| ||| Sbjct 180 AAATCAGCATTTAGCTCTTCAAAACGAGCTCTTGTGATAGAAGTATAGAAGTCAATGCCT 239 Query 517862 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 517921 || || | ||||||| |||||| | | ||||| |||| |||| | | |||||| Sbjct 240 TCAAAAAGGGAATCAATTTCAATACTTGCTTGAGAAGAAGCTGATAAAGTTCTCTTAGCA 299 Query 517922 CGTTCACATGCTGTCCTTAGTCTTCG 517947 |||||||| ||||| ||||| | ||| Sbjct 300 CGTTCACAAGCTGTTCTTAGACGTCG 325 >seq8958 Length=9061 Score = 120 bits (132), Expect = 2e-21 Identities = 364/554 (66%), Gaps = 30/554 (5%) Strand=Plus/Plus Query 517592 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 517651 ||||| ||||| | ||| |||||| | || ||||| |||| || || | || || || Sbjct 4100 ATAGCGGCTTGGACAGCGGCACCAGAAGCGACAGCCTCATAGGGGTTGATAGATTTGTTC 4159 Query 517652 AGTTTTTTACCATTGAAAAAAT-TTGAAAGAA--GTTGTCTTACCTTAGGAATACGAGAT 517708 | || ||| || ||||| || | ||| || || ||||| || || || ||||||| Sbjct 4160 AATTCTTTGCCGTTGAAGAAGTCTTGCAACAAACGTTGT---ACTTTTGGGATACGAGTA 4216 Query 517709 GATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAA 517768 ||||| ||||| || ||||| || || | |||||| || ||||| | || | | Sbjct 4217 GATCCACCAACCAAGACAATATCGTGGATGGTTGATTTGTCGAGTTTAGCGTCATGGAGA 4276 Query 517769 ACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTA 517828 | || ||||| ||||||| | | || | || ||||||||| | Sbjct 4277 GCCTTCTCAACTGGTTCAA-ATCAGCGTTCAA---------------TTCTTCGAAACGA 4320 Query 517829 GCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCG 517886 || | ||| || || | || || ||| || |||||||| ||||||| |||||| Sbjct 4321 GCACGAGT--GATGGATGTGTAGAAATCAGCGCCCTCGAACAAGGAATCAATTTCAATGT 4378 Query 517887 TAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC 517946 | || ||| || ||||| | || | || || |||||||| | || | || | | Sbjct 4379 CGGCTTAAGTGGATGAAGACAAAGCTCTCTTGGCGCGTTCACAAGGGGTGCGAAGACGAC 4438 Query 517947 GTAAGGCTTTTGCTGATTGAT-TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACA 518005 | | ||| ||| ||| | ||||||| | || | || | |||||| ||| ||| Sbjct 4439 GAAGGGCAC--GCTTGTTGGTGTCAAATCCTTCTTGTGCTTGCGCTTGAATTCTCGGACA 4496 Query 518006 CACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTA 518065 | || || | ||| ||||| ||||||||||||||||| | |||| || | ||| Sbjct 4497 AAGTGGGTAACCA-ACGGTTATCGAAATCTTCACCTCCCAAATGGGTATCTCTAGCAGTA 4555 Query 518066 GCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCA 518125 | | |||| || | ||||| || | ||||| | | |||||| || |||||| Sbjct 4556 CATTTGACTTCAAAGATACCATCATCGATGGACAAGATGGAAACATCAAAAGTACCACCA 4615 Query 518126 CCCATATCAAAAAT 518139 |||| ||| ||||| Sbjct 4616 CCCAAATCGAAAAT 4629 >seq31561 Length=9690 Score = 105 bits (116), Expect = 5e-17 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 ||||||||||||| |||||||| || || |||| | | || | || ||||||| || Sbjct 3696 CAAAAATAGTATTTGTTGGATTCATAGCCACTTGGTTCCTTGCAGAGTCGCCAATCA-AT 3638 Query 518583 GT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 518641 | || || || || || | ||||| ||||| || | ||| || || ||||| || Sbjct 3637 CTCTCAGTATCCGTGAAAGCCACATAGGATGGGGTCACCCTATTCCCCTGGTCATTGGCG 3578 Query 518642 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 518701 ||||| |||||||| |||| ||| | || || || || | | || |||||||||||| Sbjct 3577 ATAATCTCAACTTTTCCATGTTGAAAGACCCCAACGCAGGAATATGTAGTTCCTAAATCA 3518 Query 518702 ATACCAATAGCA 518713 ||||||| |||| Sbjct 3517 ATACCAACAGCA 3506 >seq39111 Length=17574 Score = 100 bits (110), Expect = 2e-15 Identities = 117/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 366988 AAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTT 367047 ||||||||||| || || || ||||||||||||||||| ||||| || ||| | ||| Sbjct 11305 AAAATTGTAGTGGCAACTATTGCATTTGGTATGGGTATAAATAAGCCTGATATCCGAGGA 11364 Query 367048 GTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCA 367107 || || |||||| ||||| ||| |||| ||||| ||||||||| ||| | || Sbjct 11365 GTGATCCATTATAATATGCCCAAAAATTTTGAGAGTTATGTTCAAGAAATAGGTCGTGCT 11424 Query 367108 GGTCGTGATGGAGAAAAATCTTATTGTTATGCATTTT 367144 ||||| ||||| |||| ||| | || || ||||| Sbjct 11425 GGTCGCGATGG-TAAAATTCTCACTGCCATTTATTTT 11460 >seq194447 Length=810 Score = 89.7 bits (98), Expect = 4e-12 Identities = 103/135 (76%), Gaps = 9/135 (7%) Strand=Plus/Plus Query 1037189 AGAATTTTTGTGCCCGATTAGTCATGAAATTATGGAACATCCAGTAGTTGCTAAAGATGG 1037248 |||| | ||||| || |||| ||||||| ||| | |||| || ||||| ||||||| Sbjct 255 AGAACTGTTGTGTCCCATTACCAATGAAATAATGACAAATCCTGTCATTGCTGAAGATGG 314 Query 1037249 ATTCACATACGAAAAGTCTAACATTCTTA-AATGGTTCGA-----GAATAAATCAACTTC 1037302 ||||||||||||||||| | || | | | |||||||||| ||| || ||||||| Sbjct 315 TTTCACATACGAAAAGTC-AGCAATTTCAGAATGGTTCGACCGTGGAAGAA--CAACTTC 371 Query 1037303 TCCTATGACTAATGA 1037317 ||| ||||| ||||| Sbjct 372 TCCAATGACAAATGA 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3769357384530946