Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq229712 105 8e-18
seq17427 89.7 6e-13
>seq229712
Length=7130
Score = 105 bits (116), Expect = 8e-18
Identities = 310/467 (66%), Gaps = 17/467 (4%)
Strand=Plus/Minus
Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561
||||||||||||||| || || | ||||| | ||| || ||||||||||||||||| ||
Sbjct 4204 ACGATCGAAACGACCAGGACGTAACAGAGCTTTATCGAGGATATCGACACGGTTTGTGGC 4145
Query 11562 GGCAATG---ACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTG 11618
|||| | |||||| | ||| ||| |||||||||||||||| ||||| |
Sbjct 4144 TGCAAGGACAACTACATTTGTAGT---TGTGTTGAAACCGTCCATTTCTACAAGAAG-TT 4089
Query 11619 GTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTT--- 11675
|| | || | ||| | || | ||| | | | | |||| || ||||
Sbjct 4088 ATTCAAAGTGTTTTCTTGTTC-TGAGTGGCCTCCGAAACTCTTGCC--ACCTCTCTTACG 4032
Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGT-GCCTGTT 11734
||| ||||| || || |||||||| || | || || || | || | | |||
Sbjct 4031 ACCAACAGCATCGATTTCATCGATAAAGAGAATGCATGG-AGCATGTTTCCTAGCCATAG 3973
Query 11735 CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGG 11794
| || | ||||| || | | | ||||||||| || ||||| || | ||| | |
Sbjct 3972 CAAACATGTCACGCACTCTGCTAGGTCCAACACCGACAAACATTTCCAAGAACTCAGAAC 3913
Query 11795 CAGAACACTG-AATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853
||||| |||| ||||| |||||||| | || ||||| |||| |||||||| ||
Sbjct 3912 CAGAA-ACTGTGATGAATGGAACATTTGCTTCTCCAGCTGTGGCCTTTGCGAGGAGTGTT 3854
Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCA 11913
||||| || || || | |||| ||| | || || ||| || || |||||| ||
Sbjct 3853 TTACCAGTTCCTGGAGGTCCAGTGAGCATAGCTCCTTTGGGAATTTTAGCACCAAGATCA 3794
Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTC 11960
| ||| | | ||| ||||| | ||||| || | |||| || |||
Sbjct 3793 ATGTATTGTTGAGGGTTCTTCAAGAAGTTTACGAACTCCATAATTTC 3747
>seq17427
Length=18297
Score = 89.7 bits (98), Expect = 6e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 167561 TACCAAATTGACCACATGGCTCG-AGAAGATTGATGTTATTCGACCCCGTATAATCGTTG 167619
||||||||||||| | || || |||||||| |||||||| || || | ||| |
Sbjct 2583 TACCAAATTGACC-CTCGGGACGAAGAAGATTAATGTTATTAGAACCAACAAAATTTTGA 2641
Query 167620 GCCAACTTGACGATCGTTTCAGCGAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTTTCA 167679
||||| || ||||| || || | || ||||||||||| ||||| || | |||||
Sbjct 2642 GCCAAATTAACGATAGTACCACACAAAGACACTTCGCCGTGATGGTATGCGGACATTTCA 2701
Query 167680 GCCACATATGCTGCCAACTGTGCAACCTTCATCTCATCTTTGAGATTCTTTTGGAAACAT 167739
|| ||| | | || | || ||||| || | ||| |||| || || ||||||
Sbjct 2702 GCGACAGAACCAGCAAGTTGGGCAACTTTAACCTCCCTTTTGTCGTTACGTTTGAAACAA 2761
Query 167740 GAATACATAACCTTGCGTTGAGAAGGTTTGAGACCATC 167777
| ||||| ||| || ||||| ||||| ||||||||
Sbjct 2762 GTATACAAAACTTTACGTTGGCCTGGTTTTAGACCATC 2799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587275029949800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |