Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq229712 105 8e-18 seq17427 89.7 6e-13 >seq229712 Length=7130 Score = 105 bits (116), Expect = 8e-18 Identities = 310/467 (66%), Gaps = 17/467 (4%) Strand=Plus/Minus Query 11502 ACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGC 11561 ||||||||||||||| || || | ||||| | ||| || ||||||||||||||||| || Sbjct 4204 ACGATCGAAACGACCAGGACGTAACAGAGCTTTATCGAGGATATCGACACGGTTTGTGGC 4145 Query 11562 GGCAATG---ACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTG 11618 |||| | |||||| | ||| ||| |||||||||||||||| ||||| | Sbjct 4144 TGCAAGGACAACTACATTTGTAGT---TGTGTTGAAACCGTCCATTTCTACAAGAAG-TT 4089 Query 11619 GTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTT--- 11675 || | || | ||| | || | ||| | | | | |||| || |||| Sbjct 4088 ATTCAAAGTGTTTTCTTGTTC-TGAGTGGCCTCCGAAACTCTTGCC--ACCTCTCTTACG 4032 Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGT-GCCTGTT 11734 ||| ||||| || || |||||||| || | || || || | || | | ||| Sbjct 4031 ACCAACAGCATCGATTTCATCGATAAAGAGAATGCATGG-AGCATGTTTCCTAGCCATAG 3973 Query 11735 CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGG 11794 | || | ||||| || | | | ||||||||| || ||||| || | ||| | | Sbjct 3972 CAAACATGTCACGCACTCTGCTAGGTCCAACACCGACAAACATTTCCAAGAACTCAGAAC 3913 Query 11795 CAGAACACTG-AATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853 ||||| |||| ||||| |||||||| | || ||||| |||| |||||||| || Sbjct 3912 CAGAA-ACTGTGATGAATGGAACATTTGCTTCTCCAGCTGTGGCCTTTGCGAGGAGTGTT 3854 Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCA 11913 ||||| || || || | |||| ||| | || || ||| || || |||||| || Sbjct 3853 TTACCAGTTCCTGGAGGTCCAGTGAGCATAGCTCCTTTGGGAATTTTAGCACCAAGATCA 3794 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTC 11960 | ||| | | ||| ||||| | ||||| || | |||| || ||| Sbjct 3793 ATGTATTGTTGAGGGTTCTTCAAGAAGTTTACGAACTCCATAATTTC 3747 >seq17427 Length=18297 Score = 89.7 bits (98), Expect = 6e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 167561 TACCAAATTGACCACATGGCTCG-AGAAGATTGATGTTATTCGACCCCGTATAATCGTTG 167619 ||||||||||||| | || || |||||||| |||||||| || || | ||| | Sbjct 2583 TACCAAATTGACC-CTCGGGACGAAGAAGATTAATGTTATTAGAACCAACAAAATTTTGA 2641 Query 167620 GCCAACTTGACGATCGTTTCAGCGAGGGAAACTTCGCCGTGGTGGTAAGCACTCTTTTCA 167679 ||||| || ||||| || || | || ||||||||||| ||||| || | ||||| Sbjct 2642 GCCAAATTAACGATAGTACCACACAAAGACACTTCGCCGTGATGGTATGCGGACATTTCA 2701 Query 167680 GCCACATATGCTGCCAACTGTGCAACCTTCATCTCATCTTTGAGATTCTTTTGGAAACAT 167739 || ||| | | || | || ||||| || | ||| |||| || || |||||| Sbjct 2702 GCGACAGAACCAGCAAGTTGGGCAACTTTAACCTCCCTTTTGTCGTTACGTTTGAAACAA 2761 Query 167740 GAATACATAACCTTGCGTTGAGAAGGTTTGAGACCATC 167777 | ||||| ||| || ||||| ||||| |||||||| Sbjct 2762 GTATACAAAACTTTACGTTGGCCTGGTTTTAGACCATC 2799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587275029949800