Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq229830 168 1e-36 seq160753 165 2e-35 seq80618 161 2e-34 seq193759 102 2e-16 >seq229830 Length=7395 Score = 168 bits (186), Expect = 1e-36 Identities = 164/210 (78%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||||||||| || || ||||| |||||||| ||| | ||| | |||||||| Sbjct 6223 AACCAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCGCTTAAAGTGCGACCATCTTC 6164 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | || ||||| || ||||| || |||||| | ||||||||||| |||||||||||||| Sbjct 6163 CAATTGTTTACCGGCAAAGATGAGACGTTGT-GATCTGGAGGAATACCTTCTTTGTCTTG 6105 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||||||||| ||||| ||||| || || ||||| | ||||| ||||| Sbjct 6104 AATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCAACTTCTAAGGTAATAGTCTT 6045 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| |||||||| || ||||| | |||||| Sbjct 6044 TCCAGTCAAAGTCTTGACGAAGATTTGCAT 6015 Score = 132 bits (146), Expect = 1e-25 Identities = 120/151 (79%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | ||| ||||| || ||||||||||| || || ||| |||||| | ||||| Sbjct 151 CAAGACCAAGTGGAGAGTAGATTCTTTTTGAATGTTATAGTCGCTAAGAGTGCGGCCATC 92 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 |||||||||||| || || || || || || ||||| ||||||||||||||||| ||||| Sbjct 91 TTCGAGCTGCTTTCCGGCAAAAATGAGACGCTGTTGATCTGGAGGAATGCCTTCCTTGTC 32 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078 || || || |||||||| ||||||||| Sbjct 31 CTGGATCTTGGCTTTGACGTTTTCAATGGTG 1 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | |||||| || || ||||||||||| ||||||||| | ||| | ||||| Sbjct 5771 CAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAAAGTGCGTCCATC 5712 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | || || || |||||||| | ||||| |||||||| || || ||||| ||||| Sbjct 5711 TTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCCTTCCTTGTC 5652 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 |||||||| || || || ||||| || || || ||| || || | ||||| || Sbjct 5651 CTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAAGGTAATTGT 5592 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||||||| || ||||| | ||||| Sbjct 5591 TTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 5559 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | || || | || || || || ||||||||||| || || || | | || Sbjct 6008 TCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGACAATGT 5949 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | || ||||| | || || || || ||||| | |||||||| ||||||||||| || Sbjct 5948 GCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACC 5889 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| || || ||| ||||| ||||| ||||| ||| || ||||| | Sbjct 5888 TTCTTTGTCTTGGATCTTGGCCTTAACGTTTTCAATTGTGTCAGAAGGCTCAACTTCCAA 5829 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || ||||| ||||| ||||| ||||| | |||||| Sbjct 5828 TGTGATGGTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCAT 5787 >seq160753 Length=592 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | ||| || | ||||| || ||||| |||||||| || ||||| | | || | Sbjct 145 GAGACGCAATACCAAATGAAGGGTTGACTCCTTTTGAATGTTATAATCTGACAATGTGCG 204 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| | |||||| || |||||||| | |||||||| |||||||| || ||||| Sbjct 205 TCCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGGGATACCTTC 264 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || |||||||| || ||| ||||||||||||||||| || || ||||||||||| Sbjct 265 CTTATCTTGAATCTTAGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACTTCAAGGGT 324 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || ||||| ||||||||||| ||||| | ||||| Sbjct 325 GATAGTTTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 363 Score = 140 bits (154), Expect = 7e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||||||||| ||||| ||||| || || ||||| | | || | |||||||| Sbjct 382 AACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGTGCGTCCATCTTC 441 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | || || || |||||||| | ||||| || |||||||| || |||||||| || || Sbjct 442 CAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTTATCCTG 501 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| ||||| ||||| || ||| ||||||||||| | || || Sbjct 502 GATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGATAGTTTT 561 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| ||||| ||||| | ||||| Sbjct 562 GCCAGTCAAGGTTTTGACGAAGATCTGCAT 591 >seq80618 Length=357 Score = 161 bits (178), Expect = 2e-34 Identities = 170/221 (77%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTC 194980 ||| | ||| || | |||||| || || || ||||| || ||||| |||| |||| || | Sbjct 342 GAGACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAG-GTGC 284 Query 194981 TCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040 |||||||| | ||||| || |||||||| | |||||||| ||||| || || |||| Sbjct 283 GTCCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTT 224 Query 195041 CTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGG 195100 |||||||||| || || |||||| || ||||||||||| ||| ||| ||||| | || Sbjct 223 CTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGG 164 Query 195101 TAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| ||||| || |||||||| || ||||| | |||||| Sbjct 163 TAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATT 123 >seq193759 Length=801 Score = 102 bits (112), Expect = 2e-16 Identities = 139/190 (73%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| |||||||||| || |||||| | |||| || | ||||| || || ||||| Sbjct 363 TTTTGGATATTGTAATTGGAAAGAGTACGGCCATATTTAAATTGCTTGCCAGCAAAGATC 304 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCT-TGACGTTCTC 195071 || |||||| ||||||||||| || ||||||||||||| | || ||| | || ||||| Sbjct 303 CATCTTTGTTGATCTGGAGGAATTCCCTCTTTGTCTTGAA-TCTTGGCTATAACATTCTC 245 Query 195072 AATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || || ||||| || | |||| | ||||| || || | | | |||||||| || Sbjct 244 GATAGTAACCGAAGGTT-CTCTTCGAAGGTAATGGTTTTACAGATAAGGGTTTTTACAAA 186 Query 195132 CACTTGCATT 195141 | ||| ||| Sbjct 185 AATTTGAATT 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106197298352447