Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq47247 100 4e-16
seq226481 86.0 8e-12
>seq47247
Length=7776
Score = 100 bits (110), Expect = 4e-16
Identities = 101/129 (78%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 126591 CGTATACCAGAAATTGGAGACAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGG 126649
||||| ||| ||||||||||||||||| |||| | |||| ||||| |||||||||||
Sbjct 6832 CGTATTCCACAAATTGGAGACAAATTTGCTTCTCGTCATGG-ACAAAAGGGAACTTGTGG 6890
Query 126650 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTAT 126709
||| ||| |||||||||||||| |||||| ||| | || || ||||||||
Sbjct 6891 TATTCAATATAGGCAAGAAGATATGCCCTTTACATCTGAAGGCTTAACACCAGATATTAT 6950
Query 126710 AATTAATCC 126718
|||||||||
Sbjct 6951 AATTAATCC 6959
>seq226481
Length=4705
Score = 86.0 bits (94), Expect = 8e-12
Identities = 129/181 (71%), Gaps = 8/181 (4%)
Strand=Plus/Minus
Query 43936 GGTACTTATGGTCGAATTGCTTCAAGATCTGGTTTATCCTTTAAAAATGGTATTGAAGTA 43995
||| | ||||| ||| ||||| |||||||||||||| | |||||||| || || ||
Sbjct 2472 GGTTCCTATGGACGAGTTGCTCCAAGATCTGGTTTAGCTGTTAAAAATTTCATCGATGTC 2413
Query 43996 GGGGCGGGTGTTATCGACGAAGATTATC----AAAACGAGTTGATGGTTATTTTACACAA 44051
|| || || ||| | || |||||||||| ||| | ||| ||| |||| |||
Sbjct 2412 GGTGCAGGAGTTGTTGATGAAGATTATCGTGGAAATC---TTG-GAGTTGTTTTGTTCAA 2357
Query 44052 CCATTCAGACACAGATTTCAATGTTGAAGTGGGAGATAGAATTGCACAAATTATTATTGA 44111
||||| ||||| |||||| | || | || || |||||||| ||| ||||| |||
Sbjct 2356 TCATTCCGACACTGATTTCGAGGTCAAGAAAGGGGACAGAATTGCCCAACTTATTTGTGA 2297
Query 44112 A 44112
|
Sbjct 2296 A 2296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 656501723328360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |