Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq229830 149 5e-31
seq160753 138 9e-28
seq80618 138 9e-28
>seq229830
Length=7395
Score = 149 bits (164), Expect = 5e-31
Identities = 177/240 (74%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|||||||| | |||||| |||||||| || |||||||||||||| || || || || |
Sbjct 6013 CCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGAC 5954
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | || |||||||| || || ||||| |||||||| |||||||| || |||
Sbjct 5953 AATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 5894
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| |||||||| ||||| || || || || |||| | |||||||| | || |||
Sbjct 5893 ATACCTTCTTTGTCTTGGATCTTGGCCTTAACGTTTTCAATTGTGTCAGAAGGCTCAACT 5834
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482
|| | |||| ||||| || || || ||||| || || || ||||| | | ||||||
Sbjct 5833 TCCAATGTGATGGTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCATACCTCCACGAAGA 5774
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| | | ||| || || || |||||||| ||||||||||| || |||||||||
Sbjct 5785 CCTCCACGAAGACGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTC 5726
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | |||| |||||||| || || || || |||||||| || || || || ||
Sbjct 5725 AAAGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGG 5666
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || || |||||||| ||| ||| |||| | ||| || || | ||| ||
Sbjct 5665 ATTCCTTCCTTGTCCTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACC 5606
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || | ||||| || || ||||| || || || ||||||||
Sbjct 5605 TCCAAGGTAATTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 5559
Score = 93.3 bits (102), Expect = 3e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301
|||||| | | ||| || || || || || |||||||||||||| || || || |||
Sbjct 166 TCCTCCGCGAAGACGCAAGACCAAGTGGAGAGTAGATTCTTTTTGAATGTTATAGTCGCT 107
Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361
| ||| | | |||| || | ||||| || ||||| || | |||||||||||| || ||
Sbjct 106 AAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAAATGAGACGCTGTTGATCTGGAGG 47
Query 101362 AATGCCTTCTTTATCTTGAATTTT 101385
||||||||| || || || || ||
Sbjct 46 AATGCCTTCCTTGTCCTGGATCTT 23
>seq160753
Length=592
Score = 138 bits (152), Expect = 9e-28
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || ||||||||||| || || ||||| || || ||||| | | || | |
Sbjct 148 ACGCAATACCAAATGAAGGGTTGACTCCTTTTGAATGTTATAATCTGACAATGTGCGTCC 207
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| ||||| ||||| || || || |||||||| |||||||| || || || ||||| ||
Sbjct 208 ATCTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTT 267
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||||||| || || || | || | ||||| || | || |||||||| ||||
Sbjct 268 ATCTTGAATCTTAGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACTTCAAGGGTGAT 327
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || |||||||| || || ||||||||
Sbjct 328 AGTTTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 363
Score = 132 bits (146), Expect = 4e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || ||||| || || || ||||| || || ||||| | | || | |
Sbjct 376 ACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGTGCGTCC 435
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| |||||||| || || || || |||||||| || ||||| || || || ||||||||
Sbjct 436 ATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTT 495
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||| || || || || || |||| | |||||||| | ||| |||||||| ||||
Sbjct 496 ATCCTGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGAT 555
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||||| || || ||||| || || ||||||||
Sbjct 556 AGTTTTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591
>seq80618
Length=357
Score = 138 bits (152), Expect = 9e-28
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || || |||||||||||||| ||||| || ||||| |||| | || | |
Sbjct 339 ACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCC 280
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| ||||||||||| || || || |||||||| |||||||| || || || ||||||||
Sbjct 279 ATCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTT 220
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||| || || || ||| |||| | ||||| || | ||| ||||| | || |
Sbjct 219 GTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTAAT 160
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || || ||||| || || || ||||||||
Sbjct 159 GGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395162554451637
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |