Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_019489.1
Length=41726
Score E
Sequences producing significant alignments: (Bits) Value
seq139140 351 3e-92
seq125644 129 2e-25
>seq139140
Length=514
Score = 351 bits (388), Expect = 3e-92
Identities = 269/319 (84%), Gaps = 0/319 (0%)
Strand=Plus/Minus
Query 40593 GCCTAATTTAGACCATATAGAGACCGTTAGCGGCTCCCACAGCCAATTTTATGTGGACTG 40652
||| ||||| |||||||| |||||||||||||| || | |||| |||| | || ||
Sbjct 321 GCCAAATTTGGACCATATCGAGACCGTTAGCGGTTCACGTGACCAACTTTACCTAGATTG 262
Query 40653 GGAAATAGCTGACACACGTAAAGCTAGGCCACAACAACGACGCTTGTTCTTCGCGTTGCT 40712
|||| ||||||||||||| || ||||||||||||||||| || | ||||| || ||||
Sbjct 261 GGAATTAGCTGACACACGCAAGGCTAGGCCACAACAACGGCGACTATTCTTTGCCCTGCT 202
Query 40713 TAGTGACATCTATACGTGGTCAGGTATGCCGACAGACTTCTTGAAAAACTTGTTTTATTT 40772
|||||||| ||||| |||||||| ||||| |||||||| |||||| | ||||| ||| |
Sbjct 201 GAGTGACATTTATACCTGGTCAGGCATGCCTACAGACTTTTTGAAAGAGTTGTTCTATCT 142
Query 40773 GCAATATGAGTCATATACGTTTGGCAAGCAGATTAGCCTGTCAGACACCACAGAATCGTC 40832
|||||||||| ||| ||||||||||| || ||||||||||||||||| |||||||||||
Sbjct 141 GCAATATGAGGAATACACGTTTGGCAAACAAATTAGCCTGTCAGACACGACAGAATCGTC 82
Query 40833 TGTGAGCGATGCTAACCAGTTACTCGACCTAGTTATCGACTTCATGTTTGAGTGGCACGT 40892
||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||
Sbjct 81 CGTGAGCGATGCTAACGTGTTACTCGACCTAGTTATCGACTTCATGTTTACGTGGCGTGT 22
Query 40893 GCCGTTCAAGGAAGGCTAT 40911
|||||||| ||||||||
Sbjct 21 ACCGTTCAAACAAGGCTAT 3
>seq125644
Length=474
Score = 129 bits (142), Expect = 2e-25
Identities = 128/166 (77%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 40841 ATGCTAACCAGTTACTCGACCTAGTTATCGACTTCATGTTTGAGTGGCACGTGCCGTTCA 40900
|||||||| ||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 358 ATGCTAACGTGTTACTCGACCTAGTTATCGACTTCATGTTTACGTGGCGTGTACCGTTCA 299
Query 40901 AGGAAGGCTATCAGCTATTGCCACGTGAGCAAGAGTATTATCTGTTTCAATGTTGCCGCC 40960
| |||||||| | | | ||||| ||| || |||||| ||| ||| |||||||| |
Sbjct 298 AACAAGGCTATGAACAGCTTCCACGAGAGGAAAGGTATTACATGTATCAGTGTTGCCGGC 239
Query 40961 ACCGAGTTTGCATGATCTGCGGTAATCGTGCTGATATCCATCATGT 41006
| ||||| ||| | || ||| | || || || || ||||||||
Sbjct 238 ATCGAGTGTGCTGTGTATGTGGTGAACGAGCAGAAATTCATCATGT 193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133035597786096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |