Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 154 7e-33
>seq54449
Length=2482
Score = 154 bits (170), Expect = 7e-33
Identities = 321/473 (68%), Gaps = 4/473 (1%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| |||||||||||||| | || || || | |||||| |||| | ||||||||
Sbjct 1617 CATAAACAAATCTGGAATCCATAAAGCGTAGAAAAGATCTCTAGCTCGGTTCTCTTCTTT 1676
Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051
||| ||| || || || | ||| || || |||||||||||||| ||||| ||||| ||||
Sbjct 1677 TCCTGTG-TTTTTCTTCAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAAT 1735
Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111
| || || || || || || || ||||||||||| |||| ||| | ||
Sbjct 1736 AAATTGCGAATGCTCCAGGCCTCTTGTTGCCTCCTTGATCTACATATCGGGCAACATTAT 1795
Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171
|||| ||| | ||||| |||||||| ||| ||||| ||| || || | | ||| |
Sbjct 1796 TGAAGACTCTTAACATGGGAACTAAACCATTTGAAGTTCCATTAGTTCCAGCAATAGCTG 1855
Query 26172 ATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAG 26231
||| | | | |||| ||| ||| | |||||||| || || | || |||||
Sbjct 1856 TCCCTTTAGCCCGAATACAGTGTACATTTAATCCGATTCCGCCTGCAGACTTGGAAATCA 1915
Query 26232 CTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATA 26291
||||| | | ||| | | ||| || |||| |||| ||| |||| || |
Sbjct 1916 TAGCACATTGTTCAACGGACTTGAAGATCCCTTCTATGGAATCTGAGCACATTGTTAGAA 1975
Query 26292 AAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCAT 26351
|||||| ||||| ||||| | | ||| | | | |||||| || || | || |
Sbjct 1976 GAAAACATGAAGACAATTGAGGCCTTGGTGTGGCAGCAGCAAATAACGTTGGAGAGGCGT 2035
Query 26352 GAGTATAATATCCTTCA-CTCAAAGCTGTATAAGTTTCAAGAACTTCATCGAT 26403
|| || |||| | |||| | |||| | |||| || |||| | || |||| ||
Sbjct 2036 GAATAAAATACCTTTCAGATAAAAGAT-TATATGTCTCAATAGCTGCATCTAT 2087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252327486884075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |