Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq54449 132 6e-26 >seq54449 Length=2482 Score = 132 bits (146), Expect = 6e-26 Identities = 310/465 (67%), Gaps = 2/465 (0%) Strand=Plus/Minus Query 75600 TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTC 75658 |||| | || |||||||| |||||| | ||||| | || || | || || | || Sbjct 1744 TCGCAATTTATTTGGAACCTTGGCATTCAGATATTTTTGAATTTTTGGATTTGAAGAAA- 1686 Query 75659 AACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGAC 75718 ||| ||| | |||||| || ||||||||| || | | | ||||||||||| Sbjct 1685 AACACAGGAAAAGAAGAGAACCGAGCTAGAGATCTTTTCTACGCTTTATGGATTCCAGAT 1626 Query 75719 CTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCA 75778 | || ||||| || ||||||| | | | ||||||||| | ||||| |||| Sbjct 1625 TTGTTTATGAAACGTGTTGAGGCTGACGAAGATTGGTCTCTTATGTGTCCTCACAAATGT 1566 Query 75779 CCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG 75838 || || | ||| | |||||| || ||||| ||||| | ||||||||| | Sbjct 1565 CCCGGATTGCACGATGTTTGGGGTGAAGAATTTGAGAAACTCTATATTAAGTATGAAAAT 1506 Query 75839 GAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCA 75898 || || | ||| || || || ||| | | ||| | || ||| | | ||| Sbjct 1505 GAAGGAAAAGCAAACAGGAAAATAAAAGCTCAACAACTCTGGTATGCAATTATTGAGTCA 1446 Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 || || |||||||| ||||||||| | ||||| |||||||| |||| |||||||| Sbjct 1445 CAAGTAGAAACTGGAACTCCATATATGTTGTACAAAGATGCTTGCAACAGAAAGAGTAAT 1386 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018 ||| | ||| | || ||||| ||| | ||||| ||||| ||||| ||||||| | Sbjct 1385 CAACAAAATGTTGGTACAATTAAGTGTAGTAATCTCTGCACTGAAATCGTAGAGTATTCT 1326 Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTT 76063 | | ||||| | || ||||| ||||| || || || || ||| Sbjct 1325 GCTCCAGATGAAATCGCCGTTTGTAATTTAGCTTCCATAGCACTT 1281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594846699538080