Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 132 6e-26
>seq54449
Length=2482
Score = 132 bits (146), Expect = 6e-26
Identities = 310/465 (67%), Gaps = 2/465 (0%)
Strand=Plus/Minus
Query 75600 TCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTC 75658
|||| | || |||||||| |||||| | ||||| | || || | || || | ||
Sbjct 1744 TCGCAATTTATTTGGAACCTTGGCATTCAGATATTTTTGAATTTTTGGATTTGAAGAAA- 1686
Query 75659 AACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGAC 75718
||| ||| | |||||| || ||||||||| || | | | |||||||||||
Sbjct 1685 AACACAGGAAAAGAAGAGAACCGAGCTAGAGATCTTTTCTACGCTTTATGGATTCCAGAT 1626
Query 75719 CTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCA 75778
| || ||||| || ||||||| | | | ||||||||| | ||||| ||||
Sbjct 1625 TTGTTTATGAAACGTGTTGAGGCTGACGAAGATTGGTCTCTTATGTGTCCTCACAAATGT 1566
Query 75779 CCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG 75838
|| || | ||| | |||||| || ||||| ||||| | ||||||||| |
Sbjct 1565 CCCGGATTGCACGATGTTTGGGGTGAAGAATTTGAGAAACTCTATATTAAGTATGAAAAT 1506
Query 75839 GAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCA 75898
|| || | ||| || || || ||| | | ||| | || ||| | | |||
Sbjct 1505 GAAGGAAAAGCAAACAGGAAAATAAAAGCTCAACAACTCTGGTATGCAATTATTGAGTCA 1446
Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958
|| || |||||||| ||||||||| | ||||| |||||||| |||| ||||||||
Sbjct 1445 CAAGTAGAAACTGGAACTCCATATATGTTGTACAAAGATGCTTGCAACAGAAAGAGTAAT 1386
Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACA 76018
||| | ||| | || ||||| ||| | ||||| ||||| ||||| ||||||| |
Sbjct 1385 CAACAAAATGTTGGTACAATTAAGTGTAGTAATCTCTGCACTGAAATCGTAGAGTATTCT 1326
Query 76019 GATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTT 76063
| | ||||| | || ||||| ||||| || || || || |||
Sbjct 1325 GCTCCAGATGAAATCGCCGTTTGTAATTTAGCTTCCATAGCACTT 1281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594846699538080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |