Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq80618 109 1e-18
seq229830 105 1e-17
seq160753 104 4e-17
seq193759 91.5 3e-13
>seq80618
Length=357
Score = 109 bits (120), Expect = 1e-18
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || |||||||| || || | ||| || ||||| |||||||| || || || |
Sbjct 305 ATGTTGTAGTCGGACAAGGTGCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGT 246
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|||||||| || || ||||||||||| ||||| || |||| || | |||| ||| ||
Sbjct 245 TGTTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTG 186
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
||||||| |||||||| | || || || ||||| || | || || || || || |||
Sbjct 185 TCGGAAGGTTCAACTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGC 126
Query 193359 ATT 193361
|||
Sbjct 125 ATT 123
>seq229830
Length=7395
Score = 105 bits (116), Expect = 1e-17
Identities = 162/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||| |||| | ||||| |||| || | |||| || || ||||| ||||||
Sbjct 6243 ATACCTCCTCGAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGGATATTGTAGTCG 6184
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||| || | | ||| || |||||||| |||||||| || | | ||| |||| |||
Sbjct 6183 CTTAAAGTGCGACCATCTTCCAATTGTTTACCGGCAAAGATGAGACGTTGT-GATCTGGA 6125
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| ||||| || || | || | ||| ||| || || || | ||||
Sbjct 6124 GGAATACCTTCTTTGTCTTGAATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGCTCA 6065
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||| || ||||| || || || | || || || || ||||||||
Sbjct 6064 ACTTCTAAGGTAATAGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCAT 6015
Score = 89.7 bits (98), Expect = 9e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || |||||||| || || || || || | || || || || || |||||||| ||
Sbjct 5714 ATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCCTTCCTT 5655
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
|| || ||||| | ||| | |||| |||||||||||| | ||||| || | || ||
Sbjct 5654 GTCCTGAATTTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAAGGTAAT 5595
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|||||||| || | || || || || || ||||| ||
Sbjct 5594 TGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCATATT 5556
>seq160753
Length=592
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| |||| || | || | ||| || || ||||| ||
Sbjct 362 ATACCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCT 421
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| || | ||| || |||||||| || || || || || | || ||||| |||
Sbjct 422 GATAATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGA 481
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||||||||| || || || | || | ||| ||| || || || | |||
Sbjct 482 GGGATTCCTTCTTTATCCTGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCA 541
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || |||||||| || || | ||||| || || || |||||
Sbjct 542 ACTTCAAGGGTGATAGTTTTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591
>seq193759
Length=801
Score = 91.5 bits (100), Expect = 3e-13
Identities = 111/150 (74%), Gaps = 1/150 (1%)
Strand=Plus/Minus
Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271
||||| || || ||||| || |||| |||||||| ||||| ||||| ||||| |||||
Sbjct 324 AATTGCTTGCCAGCAAAGATCCATCTTTGTTGATCTGGAGGAATTCCCTCTTTGTCTTGA 265
Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331
|| |||| | | | ||| |||||| | |||| || |||| | || || ||||||
Sbjct 264 ATCTTGGCTATAACATTCTCGATAGTAACCGAAGGTTCT-CTTCGAAGGTAATGGTTTTA 206
Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATT 193361
| | || ||||||||||| ||||| |||
Sbjct 205 CAGATAAGGGTTTTTACAAAAATTTGAATT 176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 897056186847120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |