Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq54449 165 2e-35
seq112590 152 2e-31
seq229712 116 1e-20
seq230024 113 1e-19
seq188621 109 2e-18
seq47247 102 2e-16
>seq54449
Length=2482
Score = 165 bits (182), Expect = 2e-35
Identities = 568/877 (65%), Gaps = 9/877 (1%)
Strand=Plus/Plus
Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690
|| ||||| || ||| ||| || ||| || ||| || || || | ||| | || |||
Sbjct 1330 TACTCTACGATTTCAGTGCAGAGATTACTACACTTAATTGTACCAACATTTTGTTGATTA 1389
Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750
|| ||||| |||||||| ||||| | || ||||| ||||| || || | ||||
Sbjct 1390 CTCTTTCTGTTGCAAGCATCTTTGTACAACATATATGGAGTTCCAGTTTCTACTTGTGAC 1449
Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810
|| | ||| |||||| | | || || |||| | |||| | | |||||
Sbjct 1450 TCAATAATTGCATACCAGAGTTGTTGAGCTTTTATTTTCCTGTTTGCTTTTCCTTCATTT 1509
Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCT-CACCGTAACAATCACTCAGTCCAGGGCA 155869
||||| || ||||| || ||| ||| || |||| || ||| || ||| || ||
Sbjct 1510 TCATACTTAATATAGAGT-TTCTCAAATTCTTCACCCCAAACATCGTGCAATCCGGGACA 1568
Query 155870 CTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATC 155929
|| | || || | || |||||| || | | | ||||| | |||||| | |||
Sbjct 1569 TTTGTGAGGACACATAAGAGACCAATCTTCGTCAGCCTCAACACGTTTCATAAACAAATC 1628
Query 155930 ACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCT 155988
||| | ||| |||||||| || || || ||| || | || ||| || |
Sbjct 1629 TGGAATCCATAAAGCGTAGAAAAGATCTCTAGCTCGGTTCTCTTCTTTTCCTGTGTTT-T 1687
Query 155989 TCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAAC 156048
|| | || || ||||| |||||| | ||| || |||| ||| || || ||
Sbjct 1688 TCTTCAAATCCAAAAATTCAAAAATATCTGAATGCCAAGGTTCCAAATAAATTGCGAATG 1747
Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105
||| ||||||| || || ||||||||||| || ||| ||||||||||| | ||
Sbjct 1748 CTCCAGGCCTCTTGTTGCCTCCTTGATCTACATATCGGGCAACATTATTGAAGACTCTTA 1807
Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165
||| |||| | |||||| ||||| ||||| ||||| |||| | || | |
Sbjct 1808 ACATGGGAACTAAACCATTTGAAGTTCCATTAGTTCCAGCAATAGCTGTCCCTTTAGCCC 1867
Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225
||| | || | || || ||| || || |||| | || ||||| ||| |||| |
Sbjct 1868 GAATACAGTGTACATTTAATCCGATTCCGCCTGCAGACTTGGAAATCATAGCACATTGTT 1927
Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAAC 156285
|| | ||||| || ||||| || ||||| ||||| ||| ||| | || |||
Sbjct 1928 CAACGGACTTGAAGATCCCTTCTATGGAATCTGAGCACATTGTTAGAAGAAAACATGAAG 1987
Query 156286 TTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACT 156345
|||||||| | |||||| |||| |||| || || | || ||||||||||||
Sbjct 1988 ACAATTGAGGCCTTGGTGTGGCAGCAGCAAATAACGTTGGAGAGGCGTGAATAAAATACC 2047
Query 156346 TATTAGACATATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAATACAG 156404
| | ||| | | || |||||||| | | || | || | | || ||||| |
Sbjct 2048 TTTCAGATAAAAGATTATATGTCTCAAT-AGCTGCATCTATGTCGTTTCCATGAATTCCT 2106
Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGA 156464
| || ||| ||||| ||| || ||||| | || |||| ||||| || || |
Sbjct 2107 ACAGCGACTCTCATAAGCATGTGTTGAGGTCTTTCAGCAATTTTTCCATTTATCTTCAAA 2166
Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501
|| |||| ||| |||| |||||||| || || ||||
Sbjct 2167 AGATATGAGCGCTCCAATGTTTTAAATCCAAAGTAAT 2203
>seq112590
Length=440
Score = 152 bits (168), Expect = 2e-31
Identities = 224/315 (71%), Gaps = 4/315 (1%)
Strand=Plus/Minus
Query 289023 TTTTTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082
|||| |||||| | ||| ||||| ||||||||||||||||| |||| || | ||
Sbjct 396 TTTTGCACCAACCGAATCGATTTCATCAATGAAAATCACACATGGAGCGCGTTCCTTAGC 337
Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142
| | ||||| ||||| ||||| ||||| | ||||| | | ||| |||||||
Sbjct 336 AGCTTTGAATAAATCTCTCACACGCCGAGCTCCCTGGCCAACCAAGACTTCGTCAAATTC 277
Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202
|| | | | | || | ||| | ||| | ||||| || ||||| || || || || |
Sbjct 276 AGGACCAGCGGCATGGAAGAAGGGTACTCTAGCTTCTCCAGCTACAGCTCTTGCTAGTAA 217
Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGC 289262
||||| || ||||| ||||| || | |||| |||||| || |||| ||| | || |
Sbjct 216 AGTCTTCCCCGTTCCTGGTGGACCAACCAATAAAACTCCTTTAGGTAACTTTCCACC--C 159
Query 289263 AGACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTT 289320
| |||| | | ||||||||| ||||||||||||| |||| |||| ||| || | |||
Sbjct 158 AAACTTGAAAACTTCTCAGGGTTCTTTAAAAATTCAACAACCTCCTTAAGCTCTTGTTTG 99
Query 289321 GCCTCATCACATCCT 289335
|| ||||| || |||
Sbjct 98 GCTTCATCGCAACCT 84
>seq229712
Length=7130
Score = 116 bits (128), Expect = 1e-20
Identities = 225/331 (68%), Gaps = 1/331 (0%)
Strand=Plus/Minus
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|||||||||||| ||||| || || || | | || |||| || || || || || ||
Sbjct 4031 ACCAACAGCATCGATTTCATCGATAAAGAGAATGCATGGAGCATGTTTCCTAGCCATAGC 3972
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
||| | || | || | | | ||||| ||| ||| ||||||| | || |||||| |
Sbjct 3971 AAACATGTCACGCACTCTGCTAGGTCCAACACCGACAAACATTTCCAAGAACTCAGAACC 3912
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| ||| ||||||| ||||||||||| || ||| ||| | || || ||||| ||
Sbjct 3911 AGAAACTGTGATGAATGGAACATTTGCTTCTCCAGCTGTGGCCTTTGCGAGGAGTGTTTT 3852
Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268
||| ||||| || ||||| | | | |||| || || | ||| || ||| | |
Sbjct 3851 ACCAGTTCCTGGAGGTCCAGTGAGCATAGCTCCTTTGGGAATTTTAGCACCAAGATCAAT 3792
Query 289269 ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATC 289328
|||| | |||| |||| || || | ||| | ||| || |||| ||| || || ||
Sbjct 3791 GTATTGTTGAGGGTTCTTCAAGAAGTTTACGAACTCCATAATTTCAATTTTAGCTTCCTC 3732
Query 289329 ACATCCTGCTACATCAGCAAAA-GTAATATT 289358
||||| || || || |||| | ||||||
Sbjct 3731 GCATCCAGCAACGTCCCTAAAATGGAATATT 3701
>seq230024
Length=7895
Score = 113 bits (124), Expect = 1e-19
Identities = 190/272 (70%), Gaps = 6/272 (2%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||| || | |||||| || |||||||||||| || || |||||||| |||
Sbjct 4472 TCCATAGCCTTTATAAGACGACGTTGGATATAACCAGTTTCAGCAGTCTTTACAGCAGTA 4413
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694
||||| ||||| ||||||| |||||||| || || | | |||| ||| | ||
Sbjct 4412 TCAATAAGACCTTCACGACCTCCCATAGCGTGAAAATAGAACTCTGATGGTGTCAAACCG 4353
Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGTA 302751
||| | || | || |||||||| | | || || || ||||||| |||| |
Sbjct 4352 GCAAGGTATGAATTTTCTACGAAACCTCTAGATTCAGGACCGTAATCGTC---CTTGATG 4296
Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811
|| ||||||| || || ||| |||| | || ||||| || || || ||||||||
Sbjct 4295 AAATGTGGCAAAGTTCTCTTCCTGAAGCCAAACGGAATACGTTTACCTTCTACGTTCTGT 4236
Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|| || | || | ||| | ||| ||||||||
Sbjct 4235 TGCCCTACACAAGCAATAACCTGGGAAATATT 4204
Score = 84.2 bits (92), Expect = 6e-11
Identities = 121/170 (71%), Gaps = 3/170 (2%)
Strand=Plus/Minus
Query 301783 GATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTCTTCAATACGGGGAACACCACGG 301842
|||||| ||||| || | ||| | | | |||||| | || | ||| |||||| ||
Sbjct 5379 GATGGAGCCTTTGGTTTCTTCGAGATATTGATAATTTCCTTAAGTCTGGGTACACCAAGG 5320
Query 301843 GTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATTCAGAGTTAATTGAGTA 301902
|||||||| |||||| | ||||||||||| |||||||| |||| || | |||||
Sbjct 5319 GTTACGTT---CTTGGAAGACACACCAGCAAAATGGAAAGTGTTCAATGTCATCTGAGTG 5263
Query 301903 GTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTCTCCTGG 301952
| || || || | | ||| || || | ||| ||||||||||||||
Sbjct 5262 GCAGGTTCTCCGAGAGATTGGGCAGCTAAAGCACCCACCATTTCTCCTGG 5213
>seq188621
Length=750
Score = 109 bits (120), Expect = 2e-18
Identities = 320/483 (66%), Gaps = 29/483 (6%)
Strand=Plus/Plus
Query 380903 TTAAAGAACTACTATGGTTTATTAAGGGTGATACATCAAACAGAAGGC---TAAAGGCAC 380959
|| ||||||| | |||||| | | ||| | || ||| ||||| | ||| ||
Sbjct 136 TTGAAGAACTGTTGTGGTTTGTGAGAGGTCAAAC--CAATGTGAAGGTACTTCAAGACA- 192
Query 380960 AGAATGTAAAAATCTGGAATGGTAATGGTAGTCGTGAGTTTTTAGATTCCCGTGGTCTAA 381019
|||| | || |||||||||| |||| | | | || || |||||| ||||||| |
Sbjct 193 AGAACATTAAGATCTGGAATGATAATTGCACAAGAGATTTCTTAGATAAATGTGGTCTTA 252
Query 381020 CCAATAACGAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAACG 381079
| ||| ||||||| ||| | || || | || || ||||| ||| | |||||| |
Sbjct 253 CAGATAGAGAAGAAGGAGACTTGGGACCAGTATATGGCTTTCAATGGCGTCATTTTGGGG 312
Query 381080 CCGATTATGATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAGTTAAAATATA 381139
| || || | | |||| || |||||||||||| || || || |||||||||| ||
Sbjct 313 CTGAATACAAAACTTGTCATGATGATTATACTGGCAAAGGCGTTGACCAGTTAAGCCATG 372
Query 381140 TCATAGAC-CAGCTAAAA--AATCC---TGAAACAAGAAATTCACGCCGACTAATTATGA 381193
| || || || ||||| ||||| ||| | ||| | || || ||||
Sbjct 373 TAATCCACACAATTAAAACCAATCCAAATGACAGAAGGATTT---GC---------ATGA 420
Query 381194 CTGCGTGGAATCCTTGCCAGATTAATGATATGGCTTTACCACCTTGCCATATTTTATGCC 381253
| || ||||||||| | || | | ||||| | ||||| || |||| ||| |
Sbjct 421 CAGCTTGGAATCCTGTGGACATCCCTAAAATGGCCCTTCCACCATGTCATAGTTTTGTAC 480
Query 381254 AGTTCAATGTTTCGGCTGGTAATAAGTTAAGTTGTGCTTTATATCAGCGTAGC-GGTGAT 381312
|||| ||||| ||| | || || |||| |||| || || | ||| ||||||
Sbjct 481 AGTTTTATGTTCAAAATGG--AGAACTT-TCTTGTTCTTTGTACCAAAG-AGCTGGTGAT 536
Query 381313 GTTGGTCTGGGTGTTCCATTCAATATTGCTTCGTATTCTATGCTTACTCGTTTAATTGCT 381372
| ||| |||| ||||||||||||||||| ||| | || | |||| | | ||||||
Sbjct 537 ATGGGTTTGGGAGTTCCATTCAATATTGCCAGCTATGTTTTGTTAACTCATATGATTGCT 596
Query 381373 CAT 381375
|||
Sbjct 597 CAT 599
>seq47247
Length=7776
Score = 102 bits (112), Expect = 2e-16
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
||| | || ||||||||| || ||||| || ||||| || || || || ||| | |
Sbjct 6992 TGGCCAATTGTCATACGAGATGGGATAGCGTGAGGATTAATTATAATATCTGGTGTTAAG 6933
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGTTT-CCAATAGTTCCCTTTTG 251957
|| |||| || ||||||||||| | || | | ||| || | ||| ||||||||||||
Sbjct 6932 CCTTCAGATGTAAAGGGCATATCTTCTTGC-CTATATTGAATACCACAAGTTCCCTTTTG 6874
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAAC 252017
||| ||||||||| || || || ||||| ||| |||||| ||||| ||||
Sbjct 6873 TCCATGACGAGAAGCAAATTTGTCTCCAATTTGTGGAATACGAACAGAACGAACACGAAT 6814
Query 252018 CTTACAGAAGTTGTAACCATCACCGTTG 252045
||||| || || || || |||| ||||
Sbjct 6813 TTTACAAAACTTATATCCTTCACTGTTG 6786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1467460706682817
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