Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq230506 96.9 4e-15 seq226481 96.9 4e-15 seq188621 96.9 4e-15 >seq230506 Length=9938 Score = 96.9 bits (106), Expect = 4e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 114976 TATGGACGAATTGCTTCAAGATCTGGTTTAAGTTTTAAAAATGGTATTGAAGTAGGAGCA 115035 ||||||||| ||||| |||||||||||||| | |||||||| || || || || ||| Sbjct 5962 TATGGACGAGTTGCTCCAAGATCTGGTTTAGCTGTTAAAAATTTCATCGATGTTGGTGCA 5903 Query 115036 GGTGTTGTTGATGAAGATTATCGAGATAATTTAATGGTTATTTTATATAACCATTCAGAT 115095 || ||||||||||| |||||||| | ||| | ||| |||| | || ||||| ||| Sbjct 5902 GGAGTTGTTGATGAGGATTATCGTGGAAATCTTGGAGTTGTTTTGTTCAATCATTCCGAT 5843 Query 115096 GTTGATTT 115103 |||||| Sbjct 5842 ACTGATTT 5835 >seq226481 Length=4705 Score = 96.9 bits (106), Expect = 4e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 114976 TATGGACGAATTGCTTCAAGATCTGGTTTAAGTTTTAAAAATGGTATTGAAGTAGGAGCA 115035 ||||||||| ||||| |||||||||||||| | |||||||| || || || || ||| Sbjct 2466 TATGGACGAGTTGCTCCAAGATCTGGTTTAGCTGTTAAAAATTTCATCGATGTCGGTGCA 2407 Query 115036 GGTGTTGTTGATGAAGATTATCGAGATAATTTAATGGTTATTTTATATAACCATTCAGAT 115095 || |||||||||||||||||||| | ||| | ||| |||| | || ||||| || Sbjct 2406 GGAGTTGTTGATGAAGATTATCGTGGAAATCTTGGAGTTGTTTTGTTCAATCATTCCGAC 2347 Query 115096 GTTGATTT 115103 |||||| Sbjct 2346 ACTGATTT 2339 >seq188621 Length=750 Score = 96.9 bits (106), Expect = 4e-15 Identities = 249/373 (67%), Gaps = 11/373 (3%) Strand=Plus/Plus Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 |||| | |||||||||||| | | | || || |||||| ||| || |||| || | Sbjct 199 TTAAGATCTGGAATGATAATTGCACAAGAGATTTCTTAGATAAATGTGGTCTTACAGATA 258 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || ||||||| || || || ||| | ||||| ||||||||| | ||| |||||| ||| Sbjct 259 GAGAAGAAGGAGACTTGGGACCAGTATATGGCTTTCAATGGCGTCATTTTGGGGCTGAAT 318 Query 172579 ATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 172638 | | ||| || ||||| || || |||| || ||||| ||||| || || Sbjct 319 ACAAAACTTGTCATGATGATTATACTGGCAAAGGCGTTGACCAGTTAAGCCATGTAATCC 378 Query 172639 ATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAG-TTGGAATGTACCT 172697 | || | ||| ||| ||| | |||||||| || ||| || ||||||| ||| Sbjct 379 ACACAATTAAAACCAATCCAAATGACAGAAGGAT-TTGCATGACAGCTTGGAAT---CCT 434 Query 172698 ---CAACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAGa 172754 | | |||||||| ||||| || || |||| ||| | ||| |||||||| Sbjct 435 GTGGACATCCCTAAAATGGCCCTTCCACCATGTCATAGTTTTGTACAGTTTTATGT--TC 492 Query 172755 aaaaaaTCAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGATTGGGGGTA 172814 |||| | ||| |||| || || |||||| | | |||| | || ||||| || Sbjct 493 AAAATGGAGAACTT-TCTTGTTCTTTGTACCAAAGAGCTGGTGATATGGGTTTGGGAGTT 551 Query 172815 CCTTATAATATTG 172827 || | ||||||| Sbjct 552 CCATTCAATATTG 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 630662962129080