Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq230506 96.9 4e-15
seq226481 96.9 4e-15
seq188621 96.9 4e-15
>seq230506
Length=9938
Score = 96.9 bits (106), Expect = 4e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 114976 TATGGACGAATTGCTTCAAGATCTGGTTTAAGTTTTAAAAATGGTATTGAAGTAGGAGCA 115035
||||||||| ||||| |||||||||||||| | |||||||| || || || || |||
Sbjct 5962 TATGGACGAGTTGCTCCAAGATCTGGTTTAGCTGTTAAAAATTTCATCGATGTTGGTGCA 5903
Query 115036 GGTGTTGTTGATGAAGATTATCGAGATAATTTAATGGTTATTTTATATAACCATTCAGAT 115095
|| ||||||||||| |||||||| | ||| | ||| |||| | || ||||| |||
Sbjct 5902 GGAGTTGTTGATGAGGATTATCGTGGAAATCTTGGAGTTGTTTTGTTCAATCATTCCGAT 5843
Query 115096 GTTGATTT 115103
||||||
Sbjct 5842 ACTGATTT 5835
>seq226481
Length=4705
Score = 96.9 bits (106), Expect = 4e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 114976 TATGGACGAATTGCTTCAAGATCTGGTTTAAGTTTTAAAAATGGTATTGAAGTAGGAGCA 115035
||||||||| ||||| |||||||||||||| | |||||||| || || || || |||
Sbjct 2466 TATGGACGAGTTGCTCCAAGATCTGGTTTAGCTGTTAAAAATTTCATCGATGTCGGTGCA 2407
Query 115036 GGTGTTGTTGATGAAGATTATCGAGATAATTTAATGGTTATTTTATATAACCATTCAGAT 115095
|| |||||||||||||||||||| | ||| | ||| |||| | || ||||| ||
Sbjct 2406 GGAGTTGTTGATGAAGATTATCGTGGAAATCTTGGAGTTGTTTTGTTCAATCATTCCGAC 2347
Query 115096 GTTGATTT 115103
||||||
Sbjct 2346 ACTGATTT 2339
>seq188621
Length=750
Score = 96.9 bits (106), Expect = 4e-15
Identities = 249/373 (67%), Gaps = 11/373 (3%)
Strand=Plus/Plus
Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518
|||| | |||||||||||| | | | || || |||||| ||| || |||| || |
Sbjct 199 TTAAGATCTGGAATGATAATTGCACAAGAGATTTCTTAGATAAATGTGGTCTTACAGATA 258
Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578
|| ||||||| || || || ||| | ||||| ||||||||| | ||| |||||| |||
Sbjct 259 GAGAAGAAGGAGACTTGGGACCAGTATATGGCTTTCAATGGCGTCATTTTGGGGCTGAAT 318
Query 172579 ATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 172638
| | ||| || ||||| || || |||| || ||||| ||||| || ||
Sbjct 319 ACAAAACTTGTCATGATGATTATACTGGCAAAGGCGTTGACCAGTTAAGCCATGTAATCC 378
Query 172639 ATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAG-TTGGAATGTACCT 172697
| || | ||| ||| ||| | |||||||| || ||| || ||||||| |||
Sbjct 379 ACACAATTAAAACCAATCCAAATGACAGAAGGAT-TTGCATGACAGCTTGGAAT---CCT 434
Query 172698 ---CAACTTGATAAAATGGTTCTTCCTCCTTGCCATACTTTAGCACAATTTTATGTCAGa 172754
| | |||||||| ||||| || || |||| ||| | ||| ||||||||
Sbjct 435 GTGGACATCCCTAAAATGGCCCTTCCACCATGTCATAGTTTTGTACAGTTTTATGT--TC 492
Query 172755 aaaaaaTCAATCTTAGATTGTCAGTTATATCAAAGATCAGCTGATTTAGGATTGGGGGTA 172814
|||| | ||| |||| || || |||||| | | |||| | || ||||| ||
Sbjct 493 AAAATGGAGAACTT-TCTTGTTCTTTGTACCAAAGAGCTGGTGATATGGGTTTGGGAGTT 551
Query 172815 CCTTATAATATTG 172827
|| | |||||||
Sbjct 552 CCATTCAATATTG 564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 630662962129080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |