Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq229024 105 1e-16 >seq229024 Length=6021 Score = 105 bits (116), Expect = 1e-16 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || || ||||| |||||||||||| | |||||| | ||| | ||||||||||| Sbjct 4714 GAGAAACGCACTGACGACATTTCGTCCTGGGACGCAGACTTCTTAAAGGTCGACCAAGGT 4655 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || | || ||||| ||||| |||||||| || | || || ||| || | ||| || Sbjct 4654 ACTTTGTTCGAGTTAATCCTTGCCGCCAATTATTTGGATATTAAGGGACTATTGGATGTG 4595 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 ||||||||||| ||||| | ||||| || ||| | || || || || | ||||| Sbjct 4594 ACTTGCAAGACCGTAGCCAATATGATCAAAGGAAAGACTCCAGAAGAAATTAGGAAGACA 4535 Query 2035746 TTTAACATCAAGTACG 2035761 || ||||||||| ||| Sbjct 4534 TTCAACATCAAGAACG 4519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7891669515051999