Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq80618 93.3 3e-14 seq160753 89.7 3e-13 >seq80618 Length=357 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| ||| ||||| || ||||| ||||| || | | |||| |||| ||| Sbjct 332 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGTCCATCTTCC 273 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | |||||||||||||||||||| ||||| || ||| | || | || || ||||| | Sbjct 272 AATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGG 213 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || ||||| | | || | || | || || || | ||| |||||||| Sbjct 212 ATCTTGGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAACTTCCAAGGTAATGGTCTTA 153 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| || || |||||||| Sbjct 152 CCAGTCAAAGTCTTGACGAAAATCTGCAT 124 >seq160753 Length=592 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| || |||||| || |||||||| || |||| |||| |||| Sbjct 380 AGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGATAATGTGCGTCCATCT 439 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || || |||||||||| |||||||| ||| | || | || || || || Sbjct 440 TCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGGGATTCCTTCTTTATCC 499 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | | || | ||| | || || |||| ||| || || Sbjct 500 TGGATCTTAGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAACTTCAAGGGTGATAGTT 559 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||| || || ||||||||||| Sbjct 560 TTGCCAGTCAAGGTTTTGACGAAGATCTGCAT 591 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| |||| ||| |||||| ||||||||||| || || | |||| |||| ||| Sbjct 155 ACCAAATGAAGGGTTGACTCCTTTTGAATGTTATAATCTGACAATGTGCGTCCATCTTCC 214 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||||||||||||||||| ||||| || ||| | || | || ||||| || | Sbjct 215 AACTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGAGGGATACCTTCCTTATCTTGA 274 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || || ||| | || | || | ||| || |||| ||| || || ||| Sbjct 275 ATCTTAGCCTTAACGTTCTCAATGGTGTCTGATGGCTCAACTTCAAGGGTGATAGTTTTT 334 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || || || |||||||| Sbjct 335 CCAGTCAAAGTTTTGACGAAAATCTGCAT 363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324775710244379