Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq229830 132 8e-26
>seq229830
Length=7395
Score = 132 bits (146), Expect = 8e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| || || |||||||| || || | || || || | | |
Sbjct 5788 TGCAAATTTTCGTCAAAACCTTGACTGGAAAAACCATCACATTGGAAGTTGAGCCTTCTG 5847
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| |||| || || || || ||| |||||||| ||||| || |||||||
Sbjct 5848 ACACAATTGAAAACGTTAAGGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAAC 5907
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || ||||| || |||||||| || || | || || |||| ||||| |
Sbjct 5908 AACGTTTGATCTTTGCTGGCAAACAATTGGAAGACGGACGCACATTGTCAGACTATAACA 5967
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| || |||||||||||||||| | ||||||||||
Sbjct 5968 TTCAAAAAGAATCTACACTCCATTTAGTATTACGTCTCAGAGGAGGTA 6015
Score = 111 bits (122), Expect = 2e-19
Identities = 162/228 (71%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || || || ||||| || ||||| | || || || | |
Sbjct 6016 TGCAAATCTTCGTCAAGACTTTGACTGGAAAGACTATTACCTTAGAAGTTGAGCCATCTG 6075
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| |||| || || ||| || ||| |||||||| ||||| || ||||| |
Sbjct 6076 ACACAATTGAAAACGTCAAGGCTAAGATTCAAGACAAAGAAGGTATTCCTCCAGATCA-C 6134
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | ||||| ||||| ||||||||||| || ||| | | || |||| || || ||||
Sbjct 6135 AACGTCTCATCTTTGCCGGTAAACAATTGGAAGATGGTCGCACTTTAAGCGACTACAATA 6194
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| ||||| ||| | || || || | || | |||||||||
Sbjct 6195 TCCAAAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTCGAGGAGGTA 6242
Score = 105 bits (116), Expect = 1e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | || || || || || ||||||||||| | || || |||| ||
Sbjct 5560 TGCAGATTTTCGTCAAGACTTTGACTGGTAAAACAATTACCTTGGAGGTTGAACCATCCG 5619
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||| ||| |||||| || || ||||| || || || || || |
Sbjct 5620 ATACTATTGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGAATCCCCCCAGACCAGC 5679
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || || || || |||||||| || ||| | || || | ||||| || |
Sbjct 5680 AACGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACTTTGAGCGATTACAACA 5739
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| || | || || ||||| || | | |||||||
Sbjct 5740 TTCAAAAAGAATCAACCCTTCACTTGGTATTGCGTCTTCGTGGAGGTA 5787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 783895941609720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |