Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq47247 87.8 2e-12 >seq47247 Length=7776 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGG 193498 ||||| || |||| || || |||||| ||| | |||| | |||| ||||||||||| Sbjct 6832 CGTATTCCACAAATTGGAGACAAATTTGCTTCTCGTCATGGAC-AAAAGGGAACTTGTGG 6890 Query 193499 TATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTAT 193558 ||| ||| |||||||||||||| |||||| || ||| | |||||||||||| Sbjct 6891 TATTCAATATAGGCAAGAAGATATGCCCTTTACATCTGAAGGCTTAACACCAGATATTAT 6950 Query 193559 TATTAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 |||||||| | ||| ||||| | ||||| ||| Sbjct 6951 AATTAATCCTCACGCTATCCCATCTCGTATGACAATT 6987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633343199151480