Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26] 231,041 sequences; 489,347,612 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq5251 264 8e-65 seq48319 176 3e-38 seq204644 161 7e-34 seq17427 147 2e-29 seq29971 143 2e-28 seq230305 131 1e-24 seq8958 129 4e-24 seq80136 122 6e-22 seq31561 100 2e-15 seq39111 95.1 9e-14 >seq5251 Length=17865 Score = 264 bits (292), Expect = 8e-65 Identities = 516/753 (69%), Gaps = 16/753 (2%) Strand=Plus/Plus Query 282137 AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTT--ACAAGACGATTAT 282194 ||||| ||||||| || | |||||| || || || | ||| | || | ||| |||| Sbjct 14371 AAATCCTTTTTATACTTGCGCTTGAATTCATCGGCAAA--ATGGTTAACCAAACGGTTAT 14428 Query 282195 CAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA-AAGT--C 282251 ||||||||||||| || || | ||| | ||| | ||||| |||||| || ||| | Sbjct 14429 CAAAATCTTCACCACCTAAATGAGTGTCTCCAGCTGTAGCCTTTACTTCAAATAAGGAAC 14488 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 | || |||| | ||| | | ||||||| ||||| || || | |||||| || | | Sbjct 14489 CTTCATCAATGGTCAAGATTGAAACATCAAAAGTTCCGCCTCCTAAATCAAATATCAAAA 14548 Query 282312 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 |||| |||| | | || ||||| | || || || |||||||| |||||||| | Sbjct 14549 CATTTCTTTCACCACTTAGATTCTTATCCAAGCCGTATGCCAAAGCAGCTGCAGTTGGCT 14608 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 ||||||| ||||||||||||||||| |||| || ||| |||||||| || ||||||| Sbjct 14609 CATTAATTATTCTCAAAACATTAAGTCCAGATATGGCTCCAGCATCTTTTGTAGCTTGTC 14668 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 | || || || ||||| || || ||||| || || || || ||| | | ||| | Sbjct 14669 TCTGAGAGTCATTAAAGTAAGCTGGAACTGTGATGACTGCGTCTTTCGTTGGCGATCCTA 14728 Query 282492 TATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 || || ||| |||| ||||||||| | |||| |||||| ||||| ||||||| Sbjct 14729 AGTAGGCTTCTGCAGTTTCTTTCATTTTCATCAAAACCATTGAACTAATTTCCTCTGGAG 14788 Query 282552 AATA---TTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACAT 282608 | | || ||| ||| | | | || | | | |||||| || ||| Sbjct 14789 TAAAGGTTTTCTT---TTCTCCCTTAAAGACCACCTGTACTTTTGGTTTTCCTCCTTCAT 14845 Query 282609 TAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG-TCATTAAAATCT 282667 ||| |||||| ||||||| | ||||| || ||| | ||| || |||| || | | Sbjct 14846 TAACAACTTT-GATGGCCATAACTTCATGTCCTCTTGGA-TCTTAGGATCATCGAATTTT 14903 Query 282668 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATAT 282727 | |||||||| || |||||||| |||| ||||| | || || | ||| |||| | Sbjct 14904 CGTCCAATTAAACGCTTTGCATCGAAAACGGTATTTTTGGGGTTCATAGCAACTTGGCTT 14963 Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 || || |||||||| || |||| | || ||||| ||| || |||||| || Sbjct 14964 TTAGCATTGTCTCCAATGAGGCGTTCAGAGTCAGTAAAGCCAACGTAACTTGGAGTAGTT 15023 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 | ||| || ||||| || || || ||||| ||||| ||||| || ||| || ||||| Sbjct 15024 CTATTTCCATGATCGTTAGCTATTATTTCGACTTTTCCATTCTGGAATATTCCAACACAG 15083 Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 | | |||||||| || || || ||||| ||| Sbjct 15084 GAATATGTTGTTCCCAAGTCGATTCCAATTGCA 15116 Score = 250 bits (276), Expect = 2e-60 Identities = 282/375 (75%), Gaps = 2/375 (1%) Strand=Plus/Minus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| | ||| |||||||| ||||||||||| |||||||||||||| || | ||||| Sbjct 4069 ACATTTAAAATTCCATTGGCGTCCAAATCAAAAGTGACTTCAATTTGTGGTATGCCTCTA 4010 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 |||| || || || || |||||| |||||||||||| ||| |||||||| || | | Sbjct 4009 GGAGCTGGAGGAATTCCAGTCAAATTGAATGTTCCCAGAAGATTGTTATCTTTGGTCATT 3950 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 || |||||| || || | ||| || || || | | ||||||||| | || ||||| Sbjct 3949 GCTCTTTCACCTTCAAATACTTGAATTGTTACAGCTGGTTGATTATCAGCGTAGGTTGTG 3890 Query 281612 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 281671 || | | | || ||| || |||||| ||| || || ||||| | || ||||||| | Sbjct 3889 AAAGTTTTTGCTTGTTTGCATGGAATTCTTGAATTCCTCTCAATCAACTTAGTCATAACA 3830 Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731 || ||||||||||| | || | ||| || || ||||||||||| || | | || |||| Sbjct 3829 CCTCCAGCTGTTTCAATGCCCAAAGATAGTGGTGTGACATCAACAAGAAGTACATCTTGA 3770 Query 281732 AGTTTTTCATCAGTTTGA-CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 | ||| ||| || || ||| |||||||||| ||||||||||||| ||||| ||||| Sbjct 3769 ATTTTGGAATCT-TTAGATCCAGAAAGAATAGCTCCTTGAATAGCAGCTCCATAAGCAAC 3711 Query 281791 AGCTTCATCAGGATT 281805 |||||||| ||||| Sbjct 3710 GGCTTCATCTGGATT 3696 Score = 114 bits (126), Expect = 1e-19 Identities = 238/351 (68%), Gaps = 14/351 (4%) Strand=Plus/Plus Query 281309 TCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAAT 281368 ||| | |||| || | || |||||| |||| |||||| | ||| | | ||| ||| ||| Sbjct 17516 TCTTCGTCTTTGAACTTTTCAGCTTCACTAAGCATTCTTTGAATATCAGCTTGAGATAAT 17575 Query 281369 CTTCCGCGATTATTAGTAATAGTAATATTCTTGG-ATTT---GTTT---GTTGATTTATC 281421 || || || ||| | ||||||||||| || |||| || ||| |||| Sbjct 17576 CTGCCTTTATCATTTTTGATAGTAATATTTTTCACATTTCCGGTACCAAGTTC-TTTA-- 17632 Query 281422 AGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGG 281481 ||||| ||||| | || ||||| || || | || || ||||| ||||||||||| Sbjct 17633 ----GCAGTTACATTCAATATTCCATTAGCGTCGAGGTCGAAAGTGACGTCAATTTGAGG 17688 Query 281482 GACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATC 281541 || ||||| || || || || || | || || ||||| || ||||||||| Sbjct 17689 AACACCTCTAGATGCTGGGGGTATTCCCGAAAGATCGAAAGTTCCAAGTAAATTATTATC 17748 Query 281542 TTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGA 281601 |||||| | |||||| || || |||| ||| || || ||| ||| ||| ||||| Sbjct 17749 TTTAGTCATAGCTCGTTCTCCTTCAAAAACTTGAATGGTTACTGCAGATTGGTTATCATC 17808 Query 281602 ATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATC 281652 ||| || || || | | | | || || ||||| ||| | | |||||| || Sbjct 17809 ATATGTAGTGAAAATTTTAGTTTGCTTGCAAGGTATTCTAGAGTTTCTCTC 17859 >seq48319 Length=4704 Score = 176 bits (194), Expect = 3e-38 Identities = 440/655 (67%), Gaps = 14/655 (2%) Strand=Plus/Plus Query 281776 AGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAA 281835 ||| ||||| |||| ||||||||| || || | || |||| | || |||||||| Sbjct 6 AGCTCCATAAGCAATAGCTTCATCTGGGTTGATAGACAAGTTTAAAGTCTTTCCATTGAA 65 Query 281836 AAA-ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAA 281894 ||| |||||| ||||| | | || || ||||| | | |||||||| ||||| || | Sbjct 66 AAAGTTTTGAATTAAGTT-TTTAACTTTTGGAATTCTTGTAGATCCTCCTACTAAAACGA 124 Query 281895 TTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAA 281954 |||| | || || || |||| ||| | |||| |||| | || || || || || | Sbjct 125 CATCATCAATTTGAGACTTTTCCATTTTAGCATCCTTTAAAGCCTTCTCTACAGGATCTA 184 Query 281955 GACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT 282014 | | | ||| || || | || ||||||||||||||| || | || | | || Sbjct 185 AAGTTTCACGAAATAAATCAGCGTTAATTTCTTCGAATTTAGCCCT-GGAAATTTTAGAT 243 Query 282015 T-ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073 | | ||||||||||||| ||| || ||| | |||||| | | || || | | || Sbjct 244 TGAAAATCAATTCCTTCATACAGAGCATCGATTTCAATATTGGCTTCAGAACTAAACGAC 303 Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG- 282132 |||| ||| || || |||||| || || |||| | || | || | | ||||| Sbjct 304 AGTGAACGCTTTGCTCGTTCAGCAGCAGTTCTTAAGCGACGAAGAGCCCTGG--GATTGG 361 Query 282133 -ATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGACG 282189 | ||||| | | || |||| ||| || |||||||| || ||| | || | ||| Sbjct 362 AGCTTAAATCCTTCTGATTCTTTCGCTTAAATTCTTCAAC-CA-AATGCTTCAACAAACG 419 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 | ||||||||||||| |||||||| | || | ||| | || || | |||| || | Sbjct 420 AGTATCAAAATCTTCTCCTCCCAAATGGGTGTCTCCAGCGGTGGCCTTCACTTCAAACAC 479 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 ||| || | | | | ||||||| || || || |||| |||||| || | Sbjct 480 AGATCCTTTAATTGTTAGTATTGAAACATCAAAAGTGCCTCCTCCCAAATCAAAGATCAA 539 Query 282310 TACA-TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 ||| ||| || | || | || || || | ||||| || | ||||| ||||||| Sbjct 540 AACATTTCTGTTTTCAGTGAT-ATTCTTGTCCAATCCATATGCTATTGCAGCTGCAGTTG 598 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGT 282423 ||||||| || ||||||| |||||| || ||||| ||| |||| ||||| || || Sbjct 599 GTTCATTTATTATTCTCAGAACATTGAGTCCAGCTATTGTTCCAGCATCCTTTGT 653 >seq204644 Length=969 Score = 161 bits (178), Expect = 7e-34 Identities = 146/184 (79%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 637119 AATTATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAG 637178 |||| | || |||| ||| |||||||||||||| ||| |||||||| ||||||||||||| Sbjct 456 AATTCTAGTAGATTTTTCATCTCCAAATATTGCAAAACAAATGCATGTTGGACATTTAAG 397 Query 637179 ATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTA 637238 ||| ||||||||||||||||| |||||||| | | ||| | ||||| || |||| Sbjct 396 ATCTACTATTATTGGTGAATCAATTTGTAGACTTCTTGAATACTTAGGACATGACGTTTT 337 Query 637239 TCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATTAA 637298 | | |||||| | || |||||||| |||||||| || |||||||| ||| ||||| | Sbjct 336 AAGAACAAATCATATCGGAGATTGGGGGACTCAATTTGGAATGTTAATAGCTCATATTCA 277 Query 637299 AAAT 637302 | || Sbjct 276 AGAT 273 >seq17427 Length=18297 Score = 147 bits (162), Expect = 2e-29 Identities = 214/300 (71%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 399168 GGAAATTACTTATGTACCTGGTCTATATAAAATTTATGATGAAGTAATTGTAAATGCGGC 399227 ||| ||||| ||||| || ||| |||||||||||| |||||| | | || |||||||| Sbjct 4471 GGATATTACATATGTGCCAGGTTTATATAAAATTTTCGATGAAATCCTGGTTAATGCGGC 4412 Query 399228 AGATCATAACAAGAGATGTCAAAC-ATGTAATATTATCAAAGTTGATATCGATCAAAAAA 399286 ||| |||| | || | || | ||| | || ||| ||| ||||||| ||| || | | Sbjct 4411 CGATAATAAGCAAAGGGATAAATCGATG-AGTACTATTAAAATTGATATTGATAAAGAGA 4353 Query 399287 CAGGTCAAATTTCTGTTTGGAATAATGGTGATGGTATTGATGTAGCAATTCATAAAGAAC 399346 | | |||||| ||||||| |||||||| || ||| |||| || |||||||| Sbjct 4352 AAAATGTAATTTCAATTTGGAACAATGGTGAAGGGATTCCCGTAGTTATGCATAAAGAGG 4293 Query 399347 ATAATATATGGGTACCATCAATGATTTTTGGAGAACTTTTAACGTCTACTAATTACGATA 399406 | || || | || || | ||||||||||| | || ||||| ||| | || |||||| Sbjct 4292 AAAAAATGTATGTCCCCACTATGATTTTTGGCCATCTCTTAACTTCTTCAAACTACGATG 4233 Query 399407 AAAACGAGGAAAAAACTGTTGGTGGTAAAAATGGTTTTGGCGCTAAGCTTGCTAATATTT 399466 | ||||| ||||| | ||||| | ||| |||| |||||||| | |||||||| Sbjct 4232 ACAACGAAGAAAAGGTTACAGGTGGAAGAAACGGTTACGGCGCTAAATTATGTAATATTT 4173 >seq29971 Length=14086 Score = 143 bits (158), Expect = 2e-28 Identities = 323/482 (67%), Gaps = 15/482 (3%) Strand=Plus/Minus Query 282402 CAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAG 282461 |||| | || ||||| || || ||||| ||| || || || || || || ||||||| Sbjct 9011 CAATGGTACCAGCATCCTTCGTAGCTTGAAGTTGGGAGTCATTGAAGTAAGCTGGAACAG 8952 Query 282462 TAATAACGGCATCTGTTACTTCTTTTCC--AATATAAGCGCTT--GCTGTTTGTTTCATT 282517 | || || |||| | || |||||| | ||| | || || || | |||||| Sbjct 8951 TGATGACAGCATTGCTGACGGTTTTTCCCTAGTATGA----TTCAGCGGTCTCCTTCATT 8896 Query 282518 TTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATAT 282577 | | | ||||| ||||| | || |||||| | ||| ||| ||||| | ||| Sbjct 8895 TAGGTGAGGATCATGGATGAGACTTCTTCTGGGAAGGATTTCTT---TTCATCCTTATAG 8839 Query 282578 GATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATATTTCATA 282637 | |||| || | || ||| | || | | ||||| | ||||| |||| ||||||| Sbjct 8838 GTAACTTGAACTTTTGATTTTCCATCAGCGCTGATAACATCGAATGGTCAATGTTTCATA 8779 Query 282638 TCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATA 282697 || ||| || | | || ||| | | | |||| || || |||| || || Sbjct 8778 TCACCTTGGACGGCTGGATCGCCAAATTTGCGGAAATTTAACCGCTTAACATCGAAGATT 8719 Query 282698 GTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC 282757 || || || || | ||| |||||| || || ||||||||||||| | |||| | Sbjct 8718 GT----GTGGGGTTCATTGCTACTTGATTCTTAGCAGCATCTCCAATCAAACGTTCACTT 8663 Query 282758 TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCA 282817 ||||| || | ||| |||||||| ||||| || |||||||| ||||| | ||| |||| Sbjct 8662 TCTGTGAAAGCAACGTATGATGGGGTTGTACGGTTACCTTGGTCATTGGAAATGATTTGG 8603 Query 282818 ACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 282877 |||| |||| ||| | ||||| |||||| | || ||| | ||||||||||| | | Sbjct 8602 ACTTCTCCATGTTGGAACACACCGACACAAGGGTATGTGGTTTCCAAATCAATACCTACA 8543 Query 282878 GC 282879 || Sbjct 8542 GC 8541 >seq230305 Length=8917 Score = 131 bits (144), Expect = 1e-24 Identities = 198/282 (70%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 ||||||||||||||| || ||||| ||| | || || | |||||| || | Sbjct 3297 ATTATCAAAATCTTCTCCACCCAACAAAGTGTCACCATTGGTGGACTTTACTTCAAACAC 3356 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 || | || | ||||| || ||||||| |||||||||||||| ||| | Sbjct 3357 ACCCTTTTGGATTTCCAAAATAGAAACATCAAAGGTTCCACCACCCAAATCGTA------ 3410 Query 282310 TACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 ||| || |||||||| | || || | |||||| || |||||||| || || || Sbjct 3411 GACAGCGATAATTTTGTCTTCAGTCTTGTCCATACCATAGGCCAAAGCAGCGGCTGTAGG 3470 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 ||| || || | | ||||||||| | ||||||||| ||| ||||| || |||||||| Sbjct 3471 TTCGTTGATGACACGCAAAACATTCAATCCAGCAATTTGTCCAGCATCCTTTGTGGCTTG 3530 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 | ||| ||||| |||||||| || ||||| |||| ||| || Sbjct 3531 ACGTTGGGAATCATTAAAATAAGCTGGAACTGTAACAACAGC 3572 >seq8958 Length=9061 Score = 129 bits (142), Expect = 4e-24 Identities = 366/554 (66%), Gaps = 30/554 (5%) Strand=Plus/Plus Query 281759 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 281818 ||||| ||||| | ||| |||||| | || ||||| |||| || || | || || || Sbjct 4100 ATAGCGGCTTGGACAGCGGCACCAGAAGCGACAGCCTCATAGGGGTTGATAGATTTGTTC 4159 Query 281819 AGTTTTTTACCATTGAAAAAAT-TTGAAAGAA--GTTGTCTTACCTTAGGAATACGAGAT 281875 | || ||| || ||||| || | ||| || || ||||| || || || ||||||| Sbjct 4160 AATTCTTTGCCGTTGAAGAAGTCTTGCAACAAACGTTGT---ACTTTTGGGATACGAGTA 4216 Query 281876 GATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAA 281935 ||||| ||||| || ||||| || || | |||||| || ||||| | || | | Sbjct 4217 GATCCACCAACCAAGACAATATCGTGGATGGTTGATTTGTCGAGTTTAGCGTCATGGAGA 4276 Query 281936 ACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTA 281995 | || ||||| ||||||| | |||| | || ||||||||| | Sbjct 4277 GCCTTCTCAACTGGTTCAA-ATCAGCGTTCAA---------------TTCTTCGAAACGA 4320 Query 281996 GCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCG 282053 || | ||| || || | || || ||| || |||||||| ||||||| |||||| Sbjct 4321 GCACGAGT--GATGGATGTGTAGAAATCAGCGCCCTCGAACAAGGAATCAATTTCAATGT 4378 Query 282054 TAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTC 282113 | || ||| || ||||| | || | || || |||||||| | || | || | | Sbjct 4379 CGGCTTAAGTGGATGAAGACAAAGCTCTCTTGGCGCGTTCACAAGGGGTGCGAAGACGAC 4438 Query 282114 GTAAGGCTTTTGCTGATTGAT-TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACA 282172 | | ||| ||| ||| | ||||||| | || | || | |||||| ||| ||| Sbjct 4439 GAAGGGCAC--GCTTGTTGGTGTCAAATCCTTCTTGTGCTTGCGCTTGAATTCTCGGACA 4496 Query 282173 CACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTA 282232 | || || | ||| ||||| ||||||||||||||||| | |||| || | ||| Sbjct 4497 AAGTGGGTAACCA-ACGGTTATCGAAATCTTCACCTCCCAAATGGGTATCTCTAGCAGTA 4555 Query 282233 GCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCA 282292 | | |||| || | ||||| || | ||||| | | ||||||| || |||||| Sbjct 4556 CATTTGACTTCAAAGATACCATCATCGATGGACAAGATGGAAACATCAAAAGTACCACCA 4615 Query 282293 CCCATATCAAAAAT 282306 |||| ||| ||||| Sbjct 4616 CCCAAATCGAAAAT 4629 >seq80136 Length=355 Score = 122 bits (134), Expect = 6e-22 Identities = 224/326 (69%), Gaps = 2/326 (1%) Strand=Plus/Plus Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 281849 |||||||||| ||||| | | || |||| || ||||||||||||||| | | ||| | Sbjct 1 CAGCTTCATCGGGATTGATGGATTTGTTTAATTCTTTACCATTGAAAAAGTCTTGAAGTA 60 Query 281850 GTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908 | | ||| || || ||||| | || |||||| |||||||| ||||| |||| | ||| Sbjct 61 GCT-TCTGGACTTTTGGAATTCTAGTTGATCCACCAACTAAGACAATATCATTGATCTGG 119 Query 281909 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAAC 281968 |||||||| ||| | ||| | |||| || ||||| | | | | ||| Sbjct 120 CCTTTATCCATTTTAGCATCACGAAGGGCTTTAGATACAGGTTCCATAGTTCCACGGAAC 179 Query 281969 AAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCT 282028 || || | | || ||||| || |||||| || | || || | ||||| ||| Sbjct 180 AAATCAGCATTTAGCTCTTCAAAACGAGCTCTTGTGATAGAAGTATAGAAGTCAATGCCT 239 Query 282029 TCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 || || | ||||||| |||||| | | ||||| |||| |||| | | |||||| Sbjct 240 TCAAAAAGGGAATCAATTTCAATACTTGCTTGAGAAGAAGCTGATAAAGTTCTCTTAGCA 299 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCG 282114 |||||||| ||||| ||||| | ||| Sbjct 300 CGTTCACAAGCTGTTCTTAGACGTCG 325 >seq31561 Length=9690 Score = 100 bits (110), Expect = 2e-15 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 ||||||||||||| |||||||| | || |||| | | || | || ||||||| || Sbjct 3696 CAAAAATAGTATTTGTTGGATTCATAGCCACTTGGTTCCTTGCAGAGTCGCCAATCA-AT 3638 Query 282750 GT-TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCA 282808 | || || || || || | ||||| ||||| || | ||| || || ||||| || Sbjct 3637 CTCTCAGTATCCGTGAAAGCCACATAGGATGGGGTCACCCTATTCCCCTGGTCATTGGCG 3578 Query 282809 ATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCA 282868 ||||| |||||||| |||| ||| | || || || || | | || |||||||||||| Sbjct 3577 ATAATCTCAACTTTTCCATGTTGAAAGACCCCAACGCAGGAATATGTAGTTCCTAAATCA 3518 Query 282869 ATACCAATAGCA 282880 ||||||| |||| Sbjct 3517 ATACCAACAGCA 3506 >seq39111 Length=17574 Score = 95.1 bits (104), Expect = 9e-14 Identities = 116/157 (74%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 131171 AAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTT 131230 ||||||||||| || || || ||||||||||||||||| ||||| || ||| | ||| Sbjct 11305 AAAATTGTAGTGGCAACTATTGCATTTGGTATGGGTATAAATAAGCCTGATATCCGAGGA 11364 Query 131231 GTTATTCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCA 131290 || || ||||| ||||| ||| |||| ||||| ||||||||| ||| | || Sbjct 11365 GTGATCCATTATAATATGCCCAAAAATTTTGAGAGTTATGTTCAAGAAATAGGTCGTGCT 11424 Query 131291 GGTCGTGATGGAGAAAAATCTTATTGTTATGCATTTT 131327 ||||| ||||| |||| ||| | || || ||||| Sbjct 11425 GGTCGCGATGG-TAAAATTCTCACTGCCATTTATTTT 11460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3729287263279266