Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq43178 107 3e-18
>seq43178
Length=4857
Score = 107 bits (118), Expect = 3e-18
Identities = 210/307 (68%), Gaps = 4/307 (1%)
Strand=Plus/Minus
Query 182830 GTTGAAACGTTTATAGATGAAATAATTGTAAGAAGAGAACTATCGGATAATTTTTGTTAC 182889
|||||| | ||| || ||| ||||| |||||||||| | ||||| ||||||| |
Sbjct 307 GTTGAAGCATTTTGTGAAGAAGCTATTGTTCGAAGAGAACTTGCTGATAACTTTTGTTTC 248
Query 182890 TATAATAAACATTACGATAGTGTT-CAGTCTACTCACGCAT-GGGCTAGAAGAACATTAG 182947
|||||| || | ||||||| || | | || | | || ||||| ||| ||| || |
Sbjct 247 TATAATGAAAACTACGATAAACTTTCGGGCT--TGAGTGATTGGGCTCGAAAAACCTTGG 190
Query 182948 AAGATCACGTTAATGATCCTAGAAAGTATATCTATTCTATTAAACAACTCGAAAAGGCAG 183007
| |||| ||| || |||| | | ||| ||| | | || | ||| | ||
Sbjct 189 ACAATCATCGTAAGGACAAAAGAAGTCCTTTGTATACTAAGACAGAATTGGAAGAAGCTA 130
Query 183008 AAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGC 183067
|||| |||| | | ||||| || | ||||| || |||| | || || |||||||
Sbjct 129 AAACTTATGATGATTTGTGGAACTCAGCTCAAATTCAATTGATTAATGAGGGTAAAATGC 70
Query 183068 ATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAG 183127
|| |||| || ||||||| ||||| || ||||| ||||||||||| |||| ||||
Sbjct 69 ATGGTTTCTTGAGAATGTATTGGGCAAAGAAGATTCTTGAATGGACTTCTTCTCCAGAAG 10
Query 183128 ATGCTTT 183134
| |||||
Sbjct 9 AAGCTTT 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 900802137161760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |