Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Megaselia_20scalaris_20[genbank_20GCA_5F000341915.2_202013-03-26]
231,041 sequences; 489,347,612 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq229830 120 2e-22
seq160753 120 2e-22
seq80618 113 3e-20
>seq229830
Length=7395
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| ||||| | |||||| || ||||| || || |||||||| ||||| || || ||
Sbjct 6014 ACCTCCTCTGAGACGTAATACTAAATGGAGTGTAGATTCTTTTTGAATGTTATAGTCTGA 5955
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||||| |||| ||||||||||| || ||||| |||||||| || |||||| | ||
Sbjct 5954 CAATGTGCGTCCGTCTTCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGAGG 5895
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||||||| || || | | ||| | || | ||||| | || |
Sbjct 5894 AATACCTTCTTTGTCTTGGATCTT-GGCCTTAACGTTTTCAATTGTGTCAGAAGGCTCAA 5836
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| ||||| || || || ||||| || || || ||||||
Sbjct 5835 CTTCCAATGTGATGGTTTTTCCAGTCAAGGTTTTGACGAAAATTTGCATA 5786
Score = 116 bits (128), Expect = 2e-21
Identities = 162/223 (73%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| || ||||| || || || |||||||| |||||||||||| | |||||| |
Sbjct 5774 ACGCAATACCAAGTGAAGGGTTGATTCTTTTTGAATGTTGTAATCGCTCAAAGTGCGTCC 5715
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| ||||||||||| || || || |||||||| ||||| ||| | || | ||||| ||
Sbjct 5714 ATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATTCCTTCCTT 5655
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
||| |||||| | || ||||| || | || ||| || ||| || || | || |
Sbjct 5654 GTCCTGAATTTT-AGCTTTAACATTTTCAATAGTATCGGATGGTTCAACCTCCAAGGTAA 5596
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGG 33755
| |||||||| || || || || || || ||||||||| ||||
Sbjct 5595 TTGTTTTACCAGTCAAAGTCTTGACGAAAATCTGCATA-TTGG 5554
Score = 89.7 bits (98), Expect = 3e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600
||||| || ||||| ||| ||||| ||||| ||||| || | ||||||| | || |||
Sbjct 7385 ACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGACAATGTGCGTCCATCTTCC 7326
Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACC 33647
|||||||| || || ||||||||||| || |||||| | || | |||
Sbjct 7325 AATTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACC 7279
>seq160753
Length=592
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||| || ||||| ||| ||||| ||||| ||||| ||
Sbjct 364 ACCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTTTGGATGTTATAATCTGA 423
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||||| | || ||||||||||| || || || |||||||| ||||||||| | ||
Sbjct 424 TAATGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGTTGCTGATCTGGAGG 483
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||||| || || || | | || | || | ||||| || ||| |
Sbjct 484 GATTCCTTCTTTATCCTGGATCTT-AGCCTTGACGTTTTCAATTGTGTCAGATGGTTCAA 542
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| ||||| ||||| || || || ||||| || ||||||||||||
Sbjct 543 CTTCAAGGGTGATAGTTTTGCCAGTCAAGGTTTTGACGAAGATCTGCATA 592
>seq80618
Length=357
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| |||||||| || || || || ||||| |||||||| |||||
Sbjct 351 ACCACCACGGAGACGCAACACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGA 292
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| |||||| | || |||||||| |||||||| || |||||||| || |||||| | ||
Sbjct 291 CAAGGTGCGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAAACGTTGTTGATCTGGTGG 232
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| || || | | |||| || | ||||||| | ||| |
Sbjct 231 GATTCCTTCTTTGTCTTGGATCTT-GGCCTTGACATTTTCAATGGTGTCGGAAGGTTCAA 173
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || || || ||||| || || || || || || ||||||||
Sbjct 172 CTTCCAAGGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 124
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 327778431270720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |